RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 DNM1LO00429 736 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 KLRC4O43908 158 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 IFNW1P05000 195 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 OR56A5P0C7T3 313 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 RPL9P32969 192 aaKnown RBP6.56□□□□□ -1.36
VPS13B-202ENST00000357162 PHC1P78364 1004 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 S100A12P80511 92 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 MRPL9Q9BYD2 267 aaKnown RBP6.56□□□□□ -1.36
VPS13B-202ENST00000357162 TCP10L2B9ZVM9 353 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 AP3D1O14617 1153 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 FYNP06241 537 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 SLC2A4P14672 509 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 FEN1P39748 380 aaKnown RBP6.56□□□□□ -1.36
VPS13B-202ENST00000357162 KAT5Q92993 513 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 SEPHS2Q99611 448 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 DGCR6LQ9BY27 220 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.56□□□□□ -1.36
VPS13B-202ENST00000357162 SNX15Q9NRS6 342 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 NUDT4Q9NZJ9 180 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 TELO2Q9Y4R8 837 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 KCNE2Q9Y6J6 123 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 URADA6NGE7 173 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 SLC28A2O43868 658 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 LIPEQ05469 1076 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 CPTPQ5TA50 214 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 TAS1R2Q8TE23 839 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 MMP19Q99542 508 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 ROGDIQ9GZN7 287 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 SETD4Q9NVD3 440 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 PCDHGB2Q9Y5G2 931 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 OTOFQ9HC10 1997 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 RPTORQ8N122 1335 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 STX16-NPEPL1H3BU86 382 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 STX16O14662 325 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 SLC16A1P53985 500 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 RALGPS1Q5JS13 557 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 ZYG11AQ6WRX3 759 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 MILR1Q7Z6M3 343 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 C11orf74Q86VG3 221 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 KIF18BQ86Y91 864 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 PORCNQ9H237 461 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 RAVER2Q9HCJ3 691 aaKnown RBP6.56□□□□□ -1.36
VPS13B-202ENST00000357162 ANKHD1Q8IWZ3 2542 aaKnown RBP6.56□□□□□ -1.36
VPS13B-202ENST00000357162 KIF13AQ9H1H9 1805 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 SNAPC2Q13487 334 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 E2F2Q14209 437 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 MSANTD1Q6ZTZ1 278 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 CBWD2Q8IUF1 395 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 MARVELD2Q8N4S9 558 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 AKAP1Q92667 903 aaKnown RBP eCLIP6.56□□□□□ -1.36
VPS13B-202ENST00000357162 SHCBP1LQ9BZQ2 653 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 GDAP2Q9NXN4 497 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 M0QYT0 321 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 GRAP2O75791 330 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 IGFBP5P24593 272 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 GALK1P51570 392 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 ALDH3A2P51648 485 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 TAS2R43P59537 309 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 PDIA6Q15084 440 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 TMEM17Q86X19 198 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 TNFAIP8L1Q8WVP5 186 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 MRI1Q9BV20 369 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 POMKQ9H5K3 350 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 VPS28Q9UK41 221 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 ERVK-11Q9UQG0 969 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 NCF1P14598 390 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-202ENST00000357162 CD72P21854 359 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 CYS1Q717R9 158 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 MGME1Q9BQP7 344 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 SLC30A2Q9BRI3 323 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 CBWD1Q9BRT8 395 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 OSBPL7Q9BZF2 842 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 ETNK2Q9NVF9 386 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 KCNH4Q9UQ05 1017 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 A3GALT2U3KPV4 340 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 CSPG4Q6UVK1 2322 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 FAM234BA2RU67 622 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 B4GALT4O60513 344 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 SUPT20HL2P0C7V6 817 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 GYS1P13807 737 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 NDST1P52848 882 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 MFSD2AQ8NA29 543 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 C1QTNF1Q9BXJ1 281 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 SLC9A3R1O14745 358 aaPredicted RBP6.56□□□□□ -1.36
VPS13B-202ENST00000357162 GPR182O15218 404 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 DNAJB6O75190 326 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 TRUB2O95900 331 aaKnown RBP6.56□□□□□ -1.36
VPS13B-202ENST00000357162 LTFP02788 710 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 BMP7P18075 431 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 ZBTB6Q15916 424 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 LRRC52Q8N7C0 313 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 MGAT4AQ9UM21 535 aa6.56□□□□□ -1.36
VPS13B-202ENST00000357162 AKAP12Q02952 1782 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ASGR1P07306 291 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ACOT2P49753 483 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 PTSQ03393 145 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 USP4Q13107 963 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 SULT1C3Q6IMI6 304 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 FOXR1Q6PIV2 292 aa6.55□□□□□ -1.36
VPS13B-202ENST00000357162 ADGRD2Q7Z7M1 963 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms