RNA–Protein interactions for RNA: ENST00000356352.6

UPF2-201, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF2, Length 5,569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-201ENST00000356352 TMEM192Q8IY95 271 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 NDNQ99608 321 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 AARSD1Q9BTE6 412 aaKnown RBP6.46□□□□□ -1.38
UPF2-201ENST00000356352 CCDC28BQ9BUN5 200 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 TRIM2Q9C040 744 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 PCBD2Q9H0N5 130 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 OGDHLQ9ULD0 1010 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 BTRCQ9Y297 605 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 VWA7Q9Y334 891 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 PCDHB9Q9Y5E1 797 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 HEBP2Q9Y5Z4 205 aa6.46□□□□□ -1.38
UPF2-201ENST00000356352 SMIM35A0A1B0GVV1 85 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 CLDN4O14493 209 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 TLL1O43897 1013 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 SNX3O60493 162 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 PLIN3O60664 434 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 RBMXL2O75526 392 aaKnown RBP6.45□□□□□ -1.38
UPF2-201ENST00000356352 FAM153BP0C7A2 387 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 TFPIP10646 304 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 DBTP11182 482 aaKnown RBP6.45□□□□□ -1.38
UPF2-201ENST00000356352 TPSB2P20231 275 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 VARSP26640 1264 aaKnown RBP6.45□□□□□ -1.38
UPF2-201ENST00000356352 ITPKBP27987 946 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 AKT2P31751 481 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 TPSAB1Q15661 275 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 SLC25A52Q3SY17 297 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 FAM153CQ494X1 144 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 CERS6Q6ZMG9 384 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 SLC30A8Q8IWU4 369 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 FBXO22Q8NEZ5 403 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 HM13Q8TCT9 377 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 SLC22A17Q8WUG5 538 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 GAS2L1Q99501 681 aaPredicted RBP6.45□□□□□ -1.38
UPF2-201ENST00000356352 TTPALQ9BTX7 342 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 TAPBPLQ9BX59 468 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 SEZ6LQ9BYH1 1024 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 MCUBQ9NWR8 336 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 IFT80Q9P2H3 777 aaPredicted RBP6.45□□□□□ -1.38
UPF2-201ENST00000356352 UPB1Q9UBR1 384 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 EML1O00423 815 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 AHCYL1O43865 530 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 TLR5O60602 858 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 KCNA5P22460 613 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 SPAM1P38567 509 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 ALDH3A2P51648 485 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 HSF2Q03933 536 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 DMPKQ09013 629 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 FCHO2Q0JRZ9 810 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 RAPSNQ13702 412 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 VPS26BQ4G0F5 336 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 TNFAIP8L3Q5GJ75 292 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 INTS6LQ5JSJ4 861 aaKnown RBP6.45□□□□□ -1.38
UPF2-201ENST00000356352 SULT1C3Q6IMI6 304 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 LLGL2Q6P1M3 1020 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 GPR142Q7Z601 462 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 HPS6Q86YV9 775 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 GPALPP1Q8IXQ4 340 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 SAMD14Q8IZD0 417 aaPredicted RBP6.45□□□□□ -1.38
UPF2-201ENST00000356352 MEIOBQ8N635 442 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 UBR7Q8N806 425 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 PDPRQ8NCN5 879 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 TMEM161BQ8NDZ6 487 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 AKT1S1Q96B36 256 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 GPER1Q99527 375 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 WDR18Q9BV38 432 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 SPATA9Q9BWV2 254 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 TM6SF2Q9BZW4 377 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 RHOJQ9H4E5 214 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 IL1RAPQ9NPH3 570 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 ATXN10Q9UBB4 475 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 XPR1Q9UBH6 696 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 FBXO5Q9UKT4 447 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 DMTF1Q9Y222 760 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 MAN2B2Q9Y2E5 1009 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 WBP11Q9Y2W2 641 aaKnown RBP6.45□□□□□ -1.38
UPF2-201ENST00000356352 RIIAD1A6NNX1 92 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 SPATA31C2B4DYI2 1134 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 CASKO14936 926 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 MDM4O15151 490 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 C22orf31O95567 290 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 ADRB2P07550 413 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 LINC00032P0C843 101 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 GOT1P17174 413 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 ZNF132P52740 706 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 SLC25A3Q00325 362 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 ZNF155Q12901 538 aaPredicted RBP6.45□□□□□ -1.38
UPF2-201ENST00000356352 AUHQ13825 339 aaKnown RBP6.45□□□□□ -1.38
UPF2-201ENST00000356352 CBFBQ13951 182 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 TMEM44Q2T9K0 475 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 CCNYL2Q5T2Q4 361 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 C9orf64Q5T6V5 341 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 ZNF730Q6ZMV8 503 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 TAF8Q7Z7C8 310 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 KIAA0319LQ8IZA0 1049 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 LEMD2Q8NC56 503 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 OR2T12Q8NG77 320 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 RNF31Q96EP0 1072 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 RBM4BQ9BQ04 359 aaKnown RBP6.45□□□□□ -1.38
UPF2-201ENST00000356352 FUCA2Q9BTY2 467 aa6.45□□□□□ -1.38
UPF2-201ENST00000356352 RBM4Q9BWF3 364 aaKnown RBP6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms