RNA–Protein interactions for RNA: ENST00000356017.8

TRIM13-201, Transcript of tripartite motif containing 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TRIM13, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-201ENST00000356017 DNAJC21Q5F1R6 531 aaKnown RBP15.49■□□□□ 0.07
TRIM13-201ENST00000356017 HENMT1Q5T8I9 393 aaKnown RBP15.49■□□□□ 0.07
TRIM13-201ENST00000356017 PDPK2PQ6A1A2 396 aa15.49■□□□□ 0.07
TRIM13-201ENST00000356017 RAET1GQ6H3X3 334 aa15.49■□□□□ 0.07
TRIM13-201ENST00000356017 KYAT3Q6YP21 454 aaKnown RBP15.49■□□□□ 0.07
TRIM13-201ENST00000356017 ABI3BPQ7Z7G0 1075 aa15.49■□□□□ 0.07
TRIM13-201ENST00000356017 DCP2Q8IU60 420 aaKnown RBP15.49■□□□□ 0.07
TRIM13-201ENST00000356017 GPR26Q8NDV2 337 aa15.49■□□□□ 0.07
TRIM13-201ENST00000356017 SCAMP4Q969E2 229 aa15.49■□□□□ 0.07
TRIM13-201ENST00000356017 ZSCAN5AQ9BUG6 496 aa15.49■□□□□ 0.07
TRIM13-201ENST00000356017 RIOK2Q9BVS4 552 aaKnown RBP15.49■□□□□ 0.07
TRIM13-201ENST00000356017 FAM129AQ9BZQ8 928 aa15.49■□□□□ 0.07
TRIM13-201ENST00000356017 ARRDC1-AS1Q9H2J1 176 aa15.49■□□□□ 0.07
TRIM13-201ENST00000356017 BPIFA1Q9NP55 256 aa15.49■□□□□ 0.07
TRIM13-201ENST00000356017 FAM114A2Q9NRY5 505 aa15.49■□□□□ 0.07
TRIM13-201ENST00000356017 NLE1Q9NVX2 485 aaPredicted RBP15.49■□□□□ 0.07
TRIM13-201ENST00000356017 CD84Q9UIB8 345 aa15.49■□□□□ 0.07
TRIM13-201ENST00000356017 APPL1Q9UKG1 709 aa15.49■□□□□ 0.07
TRIM13-201ENST00000356017 TCAF1Q9Y4C2 921 aa15.49■□□□□ 0.07
TRIM13-201ENST00000356017 ATXN2Q99700 1313 aaKnown RBP15.49■□□□□ 0.07
TRIM13-201ENST00000356017 VILLO15195 856 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 TP73O15350 636 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 BUD23O43709 281 aaKnown RBP15.48■□□□□ 0.07
TRIM13-201ENST00000356017 IGFALSP35858 605 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 TRIM23P36406 574 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 GPR1P46091 355 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 ARL4CP56559 192 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 CLDN2P57739 230 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 PFN3P60673 137 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 HIF1AQ16665 826 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 CCDC38Q502W7 563 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 TSTD2Q5T7W7 516 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 CASC4Q6P4E1 433 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 SLC23A3Q6PIS1 610 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 GCNT7Q6ZNI0 430 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 RFLNAQ6ZTI6 216 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 TRAM1L1Q8N609 369 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 ART4Q93070 314 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 KLHDC7BQ96G42 594 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 BMFQ96LC9 184 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 KIFC1Q9BW19 673 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 SPATA16Q9BXB7 569 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 MRM3Q9HC36 420 aaKnown RBP15.48■□□□□ 0.07
TRIM13-201ENST00000356017 EPB41L5Q9HCM4 733 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 IL26Q9NPH9 171 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 GRHL1Q9NZI5 618 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 NCDNQ9UBB6 729 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 KCTD3Q9Y597 815 aa15.48■□□□□ 0.07
TRIM13-201ENST00000356017 GLYATL1P3A0A0U1RQE8 302 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 A0A1W2PR77 199 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 POM121BA6NF01 834 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 H0Y8X5 98 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 H7C0S8 307 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 HOXC4P09017 264 aaPredicted RBP15.47■□□□□ 0.07
TRIM13-201ENST00000356017 PSMA3P25788 255 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 CSNK1EP49674 416 aaKnown RBP15.47■□□□□ 0.07
TRIM13-201ENST00000356017 C21orf59P57076 290 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 ITGA9Q13797 1035 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 PTK2BQ14289 1009 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 Q6ZSR6 202 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 PTAR1Q7Z6K3 402 aaPredicted RBP15.47■□□□□ 0.07
TRIM13-201ENST00000356017 OR13C4Q8NGS5 318 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 LRRC39Q96DD0 335 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 NAT9Q9BTE0 207 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 FOXP3Q9BZS1 431 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 WDR26Q9H7D7 661 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 CHRAC1Q9NRG0 131 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 SYBUQ9NX95 663 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 DMGDHQ9UI17 866 aaKnown RBP15.47■□□□□ 0.07
TRIM13-201ENST00000356017 SLC6A14Q9UN76 642 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 SOX13Q9UN79 622 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 CA5BQ9Y2D0 317 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 SLCO1B1Q9Y6L6 691 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 CEP192Q8TEP8 1941 aa15.47■□□□□ 0.07
TRIM13-201ENST00000356017 TLR4O00206 839 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 CACNB4O00305 520 aaPredicted RBP15.46■□□□□ 0.07
TRIM13-201ENST00000356017 LRP3O75074 770 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 SLU7O95391 586 aaKnown RBP15.46■□□□□ 0.07
TRIM13-201ENST00000356017 CFIP05156 583 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 THEGLP0DJG4 465 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 HTR1BP28222 390 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 THOP1P52888 689 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 PLTPP55058 493 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 CRADDP78560 199 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 TRIM61Q5EBN2 209 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 PLA2G2CQ5R387 149 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 ALS2CLQ60I27 953 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 ADAMTSL4Q6UY14 1074 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 CCNJLQ8IV13 435 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 PLA2G15Q8NCC3 412 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 RUBCNQ92622 972 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 CDKN2AIPNLQ96HQ2 116 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 DNAJC1Q96KC8 554 aaKnown RBP15.46■□□□□ 0.07
TRIM13-201ENST00000356017 APOOQ9BUR5 198 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 NUSAP1Q9BXS6 441 aaKnown RBP15.46■□□□□ 0.07
TRIM13-201ENST00000356017 TEX101Q9BY14 249 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 PHPT1Q9NRX4 125 aaPredicted RBP15.46■□□□□ 0.07
TRIM13-201ENST00000356017 MAD1L1Q9Y6D9 718 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 SPAG17Q6Q759 2223 aa15.46■□□□□ 0.07
TRIM13-201ENST00000356017 FAM237BA0A1B0GVD1 139 aa15.46■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms