RNA–Protein interactions for RNA: ENST00000355354.11

CD47-201, Transcript of CD47 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD47, Length 5,020 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-201ENST00000355354 SULT2A1Q06520 285 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 EPS8Q12929 822 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 DGKDQ16760 1214 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 SV2CQ496J9 727 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 VARS2Q5ST30 1063 aaKnown RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 SERPINA13PQ6UXR4 307 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 B3GLCTQ6Y288 498 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 VSIG1Q86XK7 387 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 BRSK2Q8IWQ3 736 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 C12orf56Q8IXR9 622 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 GPR65Q8IYL9 337 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 SNF8Q96H20 258 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 ST6GALNAC4Q9H4F1 302 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 CDCP1Q9H5V8 836 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 SMURF2Q9HAU4 748 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 SMOXQ9NWM0 555 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 GALNT8Q9NY28 637 aa5.64□□□□□ -1.51
CD47-201ENST00000355354 EXO1Q9UQ84 846 aaKnown RBP5.64□□□□□ -1.51
CD47-201ENST00000355354 M0QYV0 167 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 XPNPEP2O43895 674 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 VAPBO95292 243 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 MYL1P05976 194 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 GCFC2P16383 781 aaKnown RBP5.63□□□□□ -1.51
CD47-201ENST00000355354 BMPR1AP36894 532 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 ALDH7A1P49419 539 aaKnown RBP5.63□□□□□ -1.51
CD47-201ENST00000355354 MAP3K7CLP57077 242 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 LSM3P62310 102 aaKnown RBP5.63□□□□□ -1.51
CD47-201ENST00000355354 TNNC1P63316 161 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 DSC1Q08554 894 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 STX3Q13277 289 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 TCEAL5Q5H9L2 206 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 PPP2R2DQ66LE6 453 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 Q6ZSR9 355 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 PIWIL4Q7Z3Z4 852 aaKnown RBP5.63□□□□□ -1.51
CD47-201ENST00000355354 CLEC14AQ86T13 490 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 MYLK4Q86YV6 388 aaPredicted RBP5.63□□□□□ -1.51
CD47-201ENST00000355354 RNF38Q9H0F5 515 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 ZBP1Q9H171 429 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 MANSC1Q9H8J5 431 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 COQ10BQ9H8M1 238 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 CHST12Q9NRB3 414 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 UNC79Q9P2D8 2635 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 PMPCBO75439 489 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 IPO7O95373 1038 aaKnown RBP5.63□□□□□ -1.51
CD47-201ENST00000355354 SLC4A1P02730 911 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 OATP04181 439 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 BPGMP07738 259 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 ATP6V1C1P21283 382 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 XIAPP98170 497 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 CKAP4Q07065 602 aaKnown RBP5.63□□□□□ -1.51
CD47-201ENST00000355354 TGFBIQ15582 683 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 TMEM214Q6NUQ4 689 aaKnown RBP5.63□□□□□ -1.51
CD47-201ENST00000355354 GSTA5Q7RTV2 222 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 DSG4Q86SJ6 1040 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 SNX32Q86XE0 403 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 SLC41A1Q8IVJ1 513 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 DBF4BQ8NFT6 615 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 PYROXD1Q8WU10 500 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 EZH1Q92800 747 aaPredicted RBP5.63□□□□□ -1.51
CD47-201ENST00000355354 RBMXL1Q96E39 390 aaKnown RBP5.63□□□□□ -1.51
CD47-201ENST00000355354 NEURL2Q9BR09 285 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 TEKT3Q9BXF9 490 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 CD93Q9NPY3 652 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 SNX15Q9NRS6 342 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 WHRNQ9P202 907 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 ZFATQ9P243 1243 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 STRIP2Q9ULQ0 834 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 INSL6Q9Y581 213 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 ARL5AQ9Y689 179 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 A0A0J9YVX5 310 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 CDC7O00311 574 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 SDHDO14521 159 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 TADA2AO75478 443 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 TSPAN12O95859 305 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 BMP15O95972 392 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 ENPP1P22413 925 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 BNIP3Q12983 259 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 GBX1Q14549 363 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 UBL4BQ8N7F7 174 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 DTX3Q8N9I9 347 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 OR2T34Q8NGX1 318 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 CLHC1Q8NHS4 586 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 FAM149B1Q96BN6 582 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 NOL11Q9H8H0 719 aaKnown RBP5.63□□□□□ -1.51
CD47-201ENST00000355354 ADAMTS9Q9P2N4 1935 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 CFLARO15519 480 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 LDB2O43679 373 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 DNAJB6O75190 326 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 IL7RP16871 459 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 NFKB1P19838 968 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 ANOS1P23352 680 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 STIP1P31948 543 aaKnown RBP5.63□□□□□ -1.51
CD47-201ENST00000355354 RNF144AP50876 292 aaPredicted RBP5.63□□□□□ -1.51
CD47-201ENST00000355354 DEUP1Q05D60 604 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 NEDD9Q14511 834 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 SETDB1Q15047 1291 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 VPS26BQ4G0F5 336 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 LILRA6Q6PI73 481 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 PACS1Q6VY07 963 aa5.63□□□□□ -1.51
CD47-201ENST00000355354 GLCCI1Q86VQ1 547 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms