RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 TEX44Q53QW1 395 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 HECTD2Q5U5R9 776 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 CAPN13Q6MZZ7 669 aaPredicted RBP13.2□□□□□ -0.3
SCN8A-202ENST00000355133 FUKQ8N0W3 1084 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 FAM98AQ8NCA5 519 aaKnown RBP13.2□□□□□ -0.3
SCN8A-202ENST00000355133 TEX47Q8TBZ9 253 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 EEF1AKMT1Q8WVE0 214 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 ING5Q8WYH8 240 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 MYDGFQ969H8 173 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 C3orf18Q9UK00 162 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 TRAF6Q9Y4K3 522 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 IQCF5A8MTL0 148 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 TACR2P21452 398 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 TPP2P29144 1249 aaPredicted RBP13.2□□□□□ -0.3
SCN8A-202ENST00000355133 RCVRNP35243 200 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 TIGD2Q4W5G0 525 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 TCEAL5Q5H9L2 206 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 RNASEH2BQ5TBB1 312 aaKnown RBP13.2□□□□□ -0.3
SCN8A-202ENST00000355133 ZNF490Q9ULM2 529 aaPredicted RBP13.2□□□□□ -0.3
SCN8A-202ENST00000355133 TEX28O15482 410 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 LYPLA2O95372 231 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 BNIP2Q12982 314 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 NOMO1Q15155 1222 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 PARP15Q460N3 678 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 PEG10Q86TG7 708 aaKnown RBP13.2□□□□□ -0.3
SCN8A-202ENST00000355133 ZNF563Q8TA94 476 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 PRKAB1Q9Y478 270 aa13.2□□□□□ -0.3
SCN8A-202ENST00000355133 TOP3BO95985 862 aaKnown RBP13.19□□□□□ -0.3
SCN8A-202ENST00000355133 DBTP11182 482 aaKnown RBP13.19□□□□□ -0.3
SCN8A-202ENST00000355133 KELP23276 732 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 FSTL1Q12841 308 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 ITGADQ13349 1161 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 GRM3Q14832 879 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 BROXQ5VW32 411 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 POMZP3Q6PJE2 187 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 VSTM1Q6UX27 236 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 TSSK3Q96PN8 268 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 OXCT2Q9BYC2 517 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-202ENST00000355133 RNPEPL1Q9HAU8 725 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 PHPT1Q9NRX4 125 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-202ENST00000355133 ERGIC3Q9Y282 383 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 ZNF541Q9H0D2 1346 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 SUV39H1O43463 412 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 TSPAN1O60635 241 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 ENTPD5O75356 428 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 CCNDBP1O95273 360 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 SEC13P55735 322 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 KCNJ2P63252 427 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 INTS6LQ5JSJ4 861 aaKnown RBP13.19□□□□□ -0.3
SCN8A-202ENST00000355133 ABRAXAS1Q6UWZ7 409 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 LDB1Q86U70 411 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-202ENST00000355133 OR14C36Q8NHC7 312 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 VANGL1Q8TAA9 524 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-202ENST00000355133 PNPT1Q8TCS8 783 aaKnown RBP13.19□□□□□ -0.3
SCN8A-202ENST00000355133 DPEP3Q9H4B8 488 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 NMUR1Q9HB89 426 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 SUCOQ9UBS9 1254 aaKnown RBP13.19□□□□□ -0.3
SCN8A-202ENST00000355133 CLUHO75153 1309 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 TRBC1P01850 177 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 FGBP02675 491 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 MPSTP25325 297 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 ADSSP30520 456 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 SMARCB1Q12824 385 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 C9orf64Q5T6V5 341 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 CPTPQ5TA50 214 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 DEPDC4Q8N2C3 294 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 ZBTB2Q8N680 514 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 OR7A2PQ8NGA2 310 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 FNIP1Q8TF40 1166 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 WRAP53Q9BUR4 548 aaKnown RBP13.19□□□□□ -0.3
SCN8A-202ENST00000355133 LRMDAQ9H2I8 198 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 RHOJQ9H4E5 214 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 ZFP37Q9Y6Q3 630 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-202ENST00000355133 H3BM21 787 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 ATG13O75143 517 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 ANPEPP15144 967 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 PSMD4P55036 377 aaKnown RBP13.19□□□□□ -0.3
SCN8A-202ENST00000355133 DSC2Q02487 901 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 CIR1Q86X95 450 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-202ENST00000355133 AGAP11Q8TF27 550 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 APOLD1Q96LR9 279 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 ERVK-5Q9HDB9 667 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 OSER1Q9NX31 292 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 USP2O75604 605 aaPredicted RBP13.19□□□□□ -0.3
SCN8A-202ENST00000355133 CDK14O94921 469 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 RABGGTBP53611 331 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 GK5Q6ZS86 529 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 TSPAN14Q8NG11 270 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 TIFAQ96CG3 184 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 QKIQ96PU8 341 aaKnown RBP eCLIP13.19□□□□□ -0.3
SCN8A-202ENST00000355133 BRINP2Q9C0B6 783 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 C3orf14Q9HBI5 128 aa13.19□□□□□ -0.3
SCN8A-202ENST00000355133 MRPS33Q9Y291 106 aaKnown RBP13.19□□□□□ -0.3
SCN8A-202ENST00000355133 DHRS12A0PJE2 317 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 RASGRP1O95267 797 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 C4BPAP04003 597 aaKnown RBP13.18□□□□□ -0.3
SCN8A-202ENST00000355133 AQP1P29972 269 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 DRG2P55039 364 aaKnown RBP13.18□□□□□ -0.3
SCN8A-202ENST00000355133 TAB1Q15750 504 aa13.18□□□□□ -0.3
SCN8A-202ENST00000355133 DHDDSQ86SQ9 333 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms