RNA–Protein interactions for RNA: ENST00000354901.8

SMG6-202, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 1 (best) BASIC

Gene SMG6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-202ENST00000354901 TMEM135Q86UB9 458 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 ZMIZ2Q8NF64 920 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 ANKK1Q8NFD2 765 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 TRUB1Q8WWH5 349 aaKnown RBP9.38□□□□□ -0.91
SMG6-202ENST00000354901 EMID1Q96A84 441 aaPredicted RBP9.38□□□□□ -0.91
SMG6-202ENST00000354901 SMOXQ9NWM0 555 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 ZDHHC2Q9UIJ5 367 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 SORCS3Q9UPU3 1222 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 IFT52Q9Y366 437 aa9.38□□□□□ -0.91
SMG6-202ENST00000354901 NADKO95544 446 aaPredicted RBP9.37□□□□□ -0.91
SMG6-202ENST00000354901 CYP2B6P20813 491 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 BDNFP23560 247 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 DPP6P42658 865 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 ECT2LQ008S8 904 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 CACNB2Q08289 660 aaPredicted RBP9.37□□□□□ -0.91
SMG6-202ENST00000354901 CRY1Q16526 586 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 INSCQ1MX18 579 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 SDE2Q6IQ49 451 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 EPGNQ6UW88 154 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 TLK2Q86UE8 772 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 CARM1Q86X55 608 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 TTC30BQ8N4P2 665 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 ZFP90Q8TF47 636 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 CHID1Q9BWS9 393 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 SLC2A11Q9BYW1 496 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 DNAI2Q9GZS0 605 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 ING2Q9H160 280 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 CHST12Q9NRB3 414 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 XPR1Q9UBH6 696 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 SLC2A6Q9UGQ3 507 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 PLXNA1Q9UIW2 1896 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 MSI1O43347 362 aaKnown RBP9.37□□□□□ -0.91
SMG6-202ENST00000354901 HNRNPLP14866 589 aaKnown RBP eCLIP9.37□□□□□ -0.911e-6■■■■□ 21
SMG6-202ENST00000354901 SCNN1AP37088 669 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 CHRNA4P43681 627 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 STXBP5Q5T5C0 1151 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 SEL1L3Q68CR1 1132 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 SIGIRRQ6IA17 410 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 ESRP1Q6NXG1 681 aaKnown RBP9.37□□□□□ -0.91
SMG6-202ENST00000354901 SLCO6A1Q86UG4 719 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 FSTL5Q8N475 847 aaPredicted RBP9.37□□□□□ -0.91
SMG6-202ENST00000354901 CNTD1Q8N815 330 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 POC5Q8NA72 575 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 C3orf58Q8NDZ4 430 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 ABHD11Q8NFV4 315 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 NXNL1Q96CM4 212 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 RPL10LQ96L21 214 aaKnown RBP9.37□□□□□ -0.91
SMG6-202ENST00000354901 GLT1D1Q96MS3 346 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 DACH2Q96NX9 599 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 CDK5RAP1Q96SZ6 601 aaKnown RBP9.37□□□□□ -0.91
SMG6-202ENST00000354901 FICDQ9BVA6 458 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 FAM124BQ9H5Z6 455 aaPredicted RBP9.37□□□□□ -0.91
SMG6-202ENST00000354901 CASS4Q9NQ75 786 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 C12orf4Q9NQ89 552 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 GTSE1Q9NYZ3 720 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 CPA4Q9UI42 421 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 FBXW11Q9UKB1 542 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 PADI4Q9UM07 663 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 AHSGP02765 367 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 TFEBP19484 476 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 SCNN1GP51170 649 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 RAB15P59190 212 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 PRPSAP1Q14558 356 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 OXA1LQ15070 435 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 OTUD3Q5T2D3 398 aaPredicted RBP9.37□□□□□ -0.91
SMG6-202ENST00000354901 IFNEQ86WN2 208 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.37□□□□□ -0.91
SMG6-202ENST00000354901 TMEM102Q8N9M5 508 aaPredicted RBP9.37□□□□□ -0.91
SMG6-202ENST00000354901 SCAMP5Q8TAC9 235 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 BRI3BPQ8WY22 251 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 NT5C3BQ969T7 300 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 RTKNQ9BST9 563 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 RETREG1Q9H6L5 497 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 MIOSQ9NXC5 875 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 GTF2IRD1Q9UHL9 959 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 PMF1-BGLAPU3KQ54 211 aa9.37□□□□□ -0.91
SMG6-202ENST00000354901 SMIM35A0A1B0GVV1 85 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 CCDC162PA2VCL2 907 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 CCL22O00626 93 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 CCNKO75909 580 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 HSPA1AP0DMV8 641 aaKnown RBP9.36□□□□□ -0.91
SMG6-202ENST00000354901 HSPA1BP0DMV9 641 aaKnown RBP9.36□□□□□ -0.91
SMG6-202ENST00000354901 TSPAN8P19075 237 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 CDK18Q07002 472 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 NAB1Q13506 487 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 CCL14Q16627 93 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 TMEM236Q5W0B7 351 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 SPRYD7Q5W111 196 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 GK5Q6ZS86 529 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 ADCK1Q86TW2 530 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 TAC4Q86UU9 113 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 ZNF354CQ86Y25 554 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 GRAMD2AQ8IUY3 354 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 LGI2Q8N0V4 545 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 LPGAT1Q92604 370 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 SGCDQ92629 289 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 ELMO2Q96JJ3 720 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 SLC2A13Q96QE2 648 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 HMG20AQ9NP66 347 aa9.36□□□□□ -0.91
SMG6-202ENST00000354901 RIC8BQ9NVN3 520 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms