RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ZNF641Q96N77 438 aaPredicted RBP15.81■□□□□ 0.12
DDX55-202ENST00000354291 ULBP3Q9BZM4 244 aa15.81■□□□□ 0.12
DDX55-202ENST00000354291 GANQ9H2C0 597 aa15.81■□□□□ 0.12
DDX55-202ENST00000354291 RETREG1Q9H6L5 497 aa15.81■□□□□ 0.12
DDX55-202ENST00000354291 PHPT1Q9NRX4 125 aaPredicted RBP15.81■□□□□ 0.12
DDX55-202ENST00000354291 FANCLQ9NW38 375 aa15.81■□□□□ 0.12
DDX55-202ENST00000354291 ERRFI1Q9UJM3 462 aaPredicted RBP15.81■□□□□ 0.12
DDX55-202ENST00000354291 TMEM59LQ9UK28 342 aa15.81■□□□□ 0.12
DDX55-202ENST00000354291 SHANK1Q9Y566 2161 aa15.81■□□□□ 0.12
DDX55-202ENST00000354291 GFPT2O94808 682 aa15.8■□□□□ 0.12
DDX55-202ENST00000354291 PLEKP08567 350 aaPredicted RBP15.8■□□□□ 0.12
DDX55-202ENST00000354291 ADCY8P40145 1251 aa15.8■□□□□ 0.12
DDX55-202ENST00000354291 PGDP52209 483 aa15.8■□□□□ 0.12
DDX55-202ENST00000354291 POLR2FP61218 127 aaKnown RBP15.8■□□□□ 0.12
DDX55-202ENST00000354291 NOMO3P69849 1222 aa15.8■□□□□ 0.12
DDX55-202ENST00000354291 FOXM1Q08050 763 aa15.8■□□□□ 0.12
DDX55-202ENST00000354291 RALGDSQ12967 914 aa15.8■□□□□ 0.12
DDX55-202ENST00000354291 CDO1Q16878 200 aa15.8■□□□□ 0.12
DDX55-202ENST00000354291 PRR30Q53SZ7 412 aaPredicted RBP15.8■□□□□ 0.12
DDX55-202ENST00000354291 NAA35Q5VZE5 725 aa15.8■□□□□ 0.12
DDX55-202ENST00000354291 SASS6Q6UVJ0 657 aa15.8■□□□□ 0.12
DDX55-202ENST00000354291 GALNT6Q8NCL4 622 aa15.8■□□□□ 0.12
DDX55-202ENST00000354291 GPT2Q8TD30 523 aa15.8■□□□□ 0.12
DDX55-202ENST00000354291 MOCOSQ96EN8 888 aa15.8■□□□□ 0.12
DDX55-202ENST00000354291 TRIM55Q9BYV6 548 aa15.8■□□□□ 0.12
DDX55-202ENST00000354291 FAM207AQ9NSI2 230 aaPredicted RBP15.8■□□□□ 0.12
DDX55-202ENST00000354291 ANO10Q9NW15 660 aa15.8■□□□□ 0.12
DDX55-202ENST00000354291 LUZP4Q9P127 313 aa15.8■□□□□ 0.12
DDX55-202ENST00000354291 F8P00451 2351 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 GOLGA6CA6NDK9 693 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 GOLGA6BA6NDN3 693 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 LDLRP01130 860 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 GOLGA6DP0CG33 693 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 ZNF28P17035 718 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 GM2AP17900 193 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 SOX5P35711 763 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 MAPK9P45984 424 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 CDR2Q01850 454 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 NRG1Q02297 640 aaPredicted RBP15.79■□□□□ 0.12
DDX55-202ENST00000354291 SEMA5AQ13591 1074 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 MAP7Q14244 749 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 WDR74Q6RFH5 385 aaPredicted RBP15.79■□□□□ 0.12
DDX55-202ENST00000354291 BNIPLQ7Z465 357 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 TP53INP2Q8IXH6 220 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 SLC25A23Q9BV35 468 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 SLC29A3Q9BZD2 475 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 NOL6Q9H6R4 1146 aaKnown RBP15.79■□□□□ 0.12
DDX55-202ENST00000354291 GOLGA6AQ9NYA3 693 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 RCOR3Q9P2K3 495 aaPredicted RBP15.79■□□□□ 0.12
DDX55-202ENST00000354291 KCND3Q9UK17 655 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 NOCTQ9UK39 431 aaKnown RBP15.79■□□□□ 0.12
DDX55-202ENST00000354291 ADGRG4Q8IZF6 3080 aa15.79■□□□□ 0.12
DDX55-202ENST00000354291 TNRC6AQ8NDV7 1962 aaKnown RBP15.78■□□□□ 0.12
DDX55-202ENST00000354291 APCP25054 2843 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 A6NCN8 305 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 RASA4BC9J798 803 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 RASA4O43374 803 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 CREG1O75629 220 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 CYP1A1P04798 512 aaPredicted RBP15.78■□□□□ 0.12
DDX55-202ENST00000354291 MMP8P22894 467 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 CCL11P51671 97 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 JAM2P57087 298 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 NFATC2Q13469 925 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 C15orf59Q2T9L4 293 aaPredicted RBP15.78■□□□□ 0.12
DDX55-202ENST00000354291 AFMIDQ63HM1 303 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 DENND2CQ68D51 928 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 DOK6Q6PKX4 331 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 TRIM72Q6ZMU5 477 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 APLFQ8IW19 511 aaPredicted RBP15.78■□□□□ 0.12
DDX55-202ENST00000354291 EMC1Q8N766 993 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 STAMBPL1Q96FJ0 436 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 FRMD8Q9BZ67 464 aaPredicted RBP15.78■□□□□ 0.12
DDX55-202ENST00000354291 ATP13A3Q9H7F0 1226 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 NLRC4Q9NPP4 1024 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 SLAMF7Q9NQ25 335 aa15.78■□□□□ 0.12
DDX55-202ENST00000354291 UBA2Q9UBT2 640 aaPredicted RBP15.78■□□□□ 0.12
DDX55-202ENST00000354291 CELSR1Q9NYQ6 3014 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 LRRC10BA6NIK2 292 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 SORBS2O94875 1100 aaKnown RBP15.77■□□□□ 0.12
DDX55-202ENST00000354291 MAP3K6O95382 1288 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 CCNYL3P0C7X3 344 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 CDK11BP21127 795 aaKnown RBP15.77■□□□□ 0.12
DDX55-202ENST00000354291 SERPINA4P29622 427 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 CASP14P31944 242 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 KLK7P49862 253 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 FMO1Q01740 532 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 MYL5Q02045 173 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 STX1AQ16623 288 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 DPPA4Q7L190 304 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 LYSMD3Q7Z3D4 306 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 SRLQ86TD4 932 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 NEK11Q8NG66 645 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 SLC37A2Q8TED4 501 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 SLC20A1Q8WUM9 679 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 NUS1Q96E22 293 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 ELMO2Q96JJ3 720 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 PCMTD1Q96MG8 357 aaPredicted RBP15.77■□□□□ 0.12
DDX55-202ENST00000354291 C5orf34Q96MH7 638 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 TUBGCP5Q96RT8 1024 aa15.77■□□□□ 0.12
DDX55-202ENST00000354291 TEX101Q9BY14 249 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms