RNA–Protein interactions for RNA: ENST00000353411.10

SKP1-202, Transcript of S-phase kinase associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SKP1, Length 9,474 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-202ENST00000353411 DAG1Q14118 895 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 SPDYE7PQ495Y7 208 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 ANKS6Q68DC2 871 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 ZNF613Q6PF04 617 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 KCNMB4Q86W47 210 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 DNAJB14Q8TBM8 379 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 SH2D3AQ9BRG2 576 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 APOL5Q9BWW9 433 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 CHST12Q9NRB3 414 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 ACTR10Q9NZ32 417 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 EGFL7Q9UHF1 273 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 MAFFQ9ULX9 164 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 CLCA2Q9UQC9 943 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 C1orf167Q5SNV9 1468 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 BCLAF3A2AJT9 711 aaKnown RBP5.03□□□□□ -1.6
SKP1-202ENST00000353411 SYNDIG1LA6NDD5 238 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 SLC16A4O15374 487 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 ITGA10O75578 1167 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 LYPLA1O75608 230 aaPredicted RBP5.03□□□□□ -1.6
SKP1-202ENST00000353411 PLATP00750 562 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 AZGP1P25311 298 aaKnown RBP5.03□□□□□ -1.6
SKP1-202ENST00000353411 ACADSBP45954 432 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 CBX5P45973 191 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 CAPZA2P47755 286 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 NPY2RP49146 381 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 CDH13P55290 713 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 GCNT1Q02742 428 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 CUL2Q13617 745 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 SMAD1Q15797 465 aaKnown RBP5.03□□□□□ -1.6
SKP1-202ENST00000353411 MFSD7Q6UXD7 560 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 CREB3L2Q70SY1 520 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 DPP10Q8N608 796 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 FNDC5Q8NAU1 212 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 FBXO30Q8TB52 745 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 DCAF4Q8WV16 495 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 UTP4Q969X6 686 aaKnown RBP5.03□□□□□ -1.6
SKP1-202ENST00000353411 FEM1CQ96JP0 617 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 LURAP1Q96LR2 239 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 TM9SF2Q99805 663 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 TRIT1Q9H3H1 467 aaKnown RBP5.03□□□□□ -1.6
SKP1-202ENST00000353411 TMEM260Q9NX78 707 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 RNF112Q9ULX5 631 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 METP08581 1390 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 MYOM1P52179 1685 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 A0A0X1KG70 313 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 HMX3A6NHT5 357 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 CASKO14936 926 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 RIMBP2O15034 1052 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 KPNA5O15131 536 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 PGRMC2O15173 223 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 CDC40O60508 579 aaKnown RBP eCLIP5.03□□□□□ -1.6
SKP1-202ENST00000353411 MTA2O94776 668 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 RAP2AP10114 183 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 PROZP22891 400 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 CD6P30203 668 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 AVPR1AP37288 418 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 DYNLL1P63167 89 aaKnown RBP5.03□□□□□ -1.6
SKP1-202ENST00000353411 PITPNAQ00169 270 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 FLI1Q01543 452 aaPredicted RBP5.03□□□□□ -1.6
SKP1-202ENST00000353411 FGD3Q5JSP0 725 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 FAM160B1Q5W0V3 765 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 REP15Q6BDI9 236 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 PGBD2Q6P3X8 592 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 DRICH1Q6PGQ1 229 aaPredicted RBP5.03□□□□□ -1.6
SKP1-202ENST00000353411 AHSA2Q719I0 299 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 C14orf80Q86SX3 495 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 FAM160B2Q86V87 743 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 GMCL1Q96IK5 515 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 MAELQ96JY0 434 aaKnown RBP5.03□□□□□ -1.6
SKP1-202ENST00000353411 MARK4Q96L34 752 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 FERD3LQ96RJ6 166 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 CCDC106Q9BWC9 280 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 POMKQ9H5K3 350 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 THG1LQ9NWX6 298 aaKnown RBP5.03□□□□□ -1.6
SKP1-202ENST00000353411 GLTPQ9NZD2 209 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 PTTG3PQ9NZH4 202 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 GJA3Q9Y6H8 435 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 SPATA31A3Q5VYP0 1347 aa5.03□□□□□ -1.6
SKP1-202ENST00000353411 WDR27A2RRH5 827 aa5.02□□□□□ -1.61
SKP1-202ENST00000353411 H3BM21 787 aa5.02□□□□□ -1.61
SKP1-202ENST00000353411 RFPL1O75677 317 aa5.02□□□□□ -1.61
SKP1-202ENST00000353411 RASAL1O95294 804 aa5.02□□□□□ -1.61
SKP1-202ENST00000353411 TFAP2AP05549 437 aa5.02□□□□□ -1.61
SKP1-202ENST00000353411 PROS1P07225 676 aa5.02□□□□□ -1.61
SKP1-202ENST00000353411 ZNF14P17017 642 aaPredicted RBP5.02□□□□□ -1.61
SKP1-202ENST00000353411 ALDH4A1P30038 563 aa5.02□□□□□ -1.61
SKP1-202ENST00000353411 MARCKSL1P49006 195 aa5.02□□□□□ -1.61
SKP1-202ENST00000353411 DCDC1P59894 354 aa5.02□□□□□ -1.61
SKP1-202ENST00000353411 TXNL4AP83876 142 aaKnown RBP5.02□□□□□ -1.61
SKP1-202ENST00000353411 SF3B4Q15427 424 aaKnown RBP eCLIP5.02□□□□□ -1.617e-7■■■■□ 21.6
SKP1-202ENST00000353411 ZNF470Q6ECI4 717 aa5.02□□□□□ -1.61
SKP1-202ENST00000353411 TCEAL6Q6IPX3 200 aa5.02□□□□□ -1.61
SKP1-202ENST00000353411 CXXC5Q7LFL8 322 aaKnown RBP5.02□□□□□ -1.61
SKP1-202ENST00000353411 IZUMO1Q8IYV9 350 aa5.02□□□□□ -1.61
SKP1-202ENST00000353411 OXR1Q8N573 874 aa5.02□□□□□ -1.61
SKP1-202ENST00000353411 LNX1Q8TBB1 728 aaPredicted RBP5.02□□□□□ -1.61
SKP1-202ENST00000353411 PELOQ9BRX2 385 aaKnown RBP5.02□□□□□ -1.61
SKP1-202ENST00000353411 SCPEP1Q9HB40 452 aa5.02□□□□□ -1.61
SKP1-202ENST00000353411 PAK1IP1Q9NWT1 392 aaPredicted RBP5.02□□□□□ -1.61
SKP1-202ENST00000353411 AGO2Q9UKV8 859 aaKnown RBP5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms