RNA–Protein interactions for RNA: ENST00000353317.9

TRIM55-204, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 2,624 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-204ENST00000353317 TMA16Q96EY4 203 aaKnown RBP8.61□□□□□ -1.03
TRIM55-204ENST00000353317 GPR22Q99680 433 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 CORO1BQ9BR76 489 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 SLC46A2Q9BY10 475 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 ZYG11BQ9C0D3 744 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 IL22Q9GZX6 179 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 NACA2Q9H009 215 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 EFCAB1Q9HAE3 211 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 TMEM248Q9NWD8 314 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 PLK2Q9NYY3 685 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 TLK1Q9UKI8 766 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 TMCO1Q9UM00 188 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 CDYLQ9Y232 598 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 CCL26Q9Y258 94 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 COPG1Q9Y678 874 aaKnown RBP8.61□□□□□ -1.03
TRIM55-204ENST00000353317 ZFP37Q9Y6Q3 630 aaPredicted RBP8.61□□□□□ -1.03
TRIM55-204ENST00000353317 ANKRD36A6QL64 1941 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 RFXAPO00287 272 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 FGF10O15520 208 aaPredicted RBP8.61□□□□□ -1.03
TRIM55-204ENST00000353317 MT-CYBP00156 380 aaPredicted RBP8.61□□□□□ -1.03
TRIM55-204ENST00000353317 APOA4P06727 396 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 FAM58BPP0C7Q3 252 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 MBL2P11226 248 aaPredicted RBP8.61□□□□□ -1.03
TRIM55-204ENST00000353317 ZNF26P17031 533 aaPredicted RBP8.61□□□□□ -1.03
TRIM55-204ENST00000353317 RHOQP17081 205 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 HDCP19113 662 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 NFKB1P19838 968 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 GABRB3P28472 473 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 ADSLP30566 484 aaPredicted RBP8.61□□□□□ -1.03
TRIM55-204ENST00000353317 CREB5Q02930 508 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 ZNF460Q14592 562 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 USP10Q14694 798 aaKnown RBP8.61□□□□□ -1.03
TRIM55-204ENST00000353317 VEPH1Q14D04 833 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 C5orf22Q49AR2 442 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 SETD3Q86TU7 594 aaPredicted RBP8.61□□□□□ -1.03
TRIM55-204ENST00000353317 SPATA6LQ8N4H0 392 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 RDH11Q8TC12 318 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 DLG3Q92796 817 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 ABHD8Q96I13 439 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 TEKT5Q96M29 485 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 NSMCE3Q96MG7 304 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 HTATIP2Q9BUP3 242 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 SLC2A11Q9BYW1 496 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 UNKQ9C0B0 810 aaKnown RBP8.61□□□□□ -1.03
TRIM55-204ENST00000353317 GBA3Q9H227 469 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 SUDS3Q9H7L9 328 aaPredicted RBP8.61□□□□□ -1.03
TRIM55-204ENST00000353317 DNMT3BQ9UBC3 853 aaKnown RBP8.61□□□□□ -1.03
TRIM55-204ENST00000353317 RUVBL2Q9Y230 463 aaKnown RBP8.61□□□□□ -1.03
TRIM55-204ENST00000353317 CPQQ9Y646 472 aa8.61□□□□□ -1.03
TRIM55-204ENST00000353317 HNRNPRO43390 633 aaKnown RBP8.6□□□□□ -1.03
TRIM55-204ENST00000353317 DLX3O60479 287 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 CLASP2O75122 1294 aaKnown RBP8.6□□□□□ -1.03
TRIM55-204ENST00000353317 VAPBO95292 243 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 GLUD1P00367 558 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 AHSGP02765 367 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 HK2P52789 917 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 SMAD3P84022 425 aaKnown RBP8.6□□□□□ -1.03
TRIM55-204ENST00000353317 SLC10A7Q0GE19 358 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 NRF1Q16656 503 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 IL23RQ5VWK5 629 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 KDM1BQ8NB78 822 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 WFDC5Q8TCV5 224 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 STYXQ8WUJ0 223 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 BHMTQ93088 406 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 ATP6V1E2Q96A05 226 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 SCYL1Q96KG9 808 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 TSGA13Q96PP4 275 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 OMDQ99983 421 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 MRPL1Q9BYD6 325 aaKnown RBP8.6□□□□□ -1.03
TRIM55-204ENST00000353317 PBX4Q9BYU1 374 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 CATSPERBQ9H7T0 1116 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 PREBQ9HCU5 417 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 XPR1Q9UBH6 696 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 VTI1BQ9UEU0 232 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 BCAP29Q9UHQ4 241 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 MID2Q9UJV3 735 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 CLEC4EQ9ULY5 219 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 DMTF1Q9Y222 760 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 MAGEB16A2A368 324 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 C7orf72A4D263 438 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 MUSKO15146 869 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 TMCC1O94876 653 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 HLA-DQB2P05538 268 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 CCNCP24863 283 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 ZNF135P52742 658 aaPredicted RBP8.6□□□□□ -1.03
TRIM55-204ENST00000353317 MAXP61244 160 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 PTK2BQ14289 1009 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 RFTN1Q14699 578 aaPredicted RBP8.6□□□□□ -1.03
TRIM55-204ENST00000353317 HERC3Q15034 1050 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 TSTD2Q5T7W7 516 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 PTAR1Q7Z6K3 402 aaPredicted RBP8.6□□□□□ -1.03
TRIM55-204ENST00000353317 AMIGO2Q86SJ2 522 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 SLC41A1Q8IVJ1 513 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 CEP97Q8IW35 865 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 PGBD5Q8N414 524 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 C12orf76Q8N812 135 aaPredicted RBP8.6□□□□□ -1.03
TRIM55-204ENST00000353317 ST13P5Q8NFI4 369 aaPredicted RBP8.6□□□□□ -1.03
TRIM55-204ENST00000353317 OR7D4Q8NG98 312 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 ZSWIM3Q96MP5 696 aa8.6□□□□□ -1.03
TRIM55-204ENST00000353317 IL12RB2Q99665 862 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms