RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 ILF2Q12905 390 aaKnown RBP24.49■■□□□ 1.51
CPNE1-202ENST00000352393 ATP6AP1Q15904 470 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 MORN1Q5T089 497 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 C9orf131Q5VYM1 1079 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 ARRDC2Q8TBH0 407 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 HASPINQ8TF76 798 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 PABPC5Q96DU9 382 aaKnown RBP24.49■■□□□ 1.51
CPNE1-202ENST00000352393 MYRFLQ96LU7 910 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 AP5M1Q9H0R1 490 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 UXTQ9UBK9 157 aaPredicted RBP24.49■■□□□ 1.51
CPNE1-202ENST00000352393 EGFL7Q9UHF1 273 aa24.49■■□□□ 1.51
CPNE1-202ENST00000352393 A0A087WXM4 84 aa24.48■■□□□ 1.51
CPNE1-202ENST00000352393 UBXN8O00124 270 aa24.48■■□□□ 1.51
CPNE1-202ENST00000352393 PCNTO95613 3336 aa24.48■■□□□ 1.51
CPNE1-202ENST00000352393 ZNF37AP17032 561 aaPredicted RBP24.48■■□□□ 1.51
CPNE1-202ENST00000352393 HOXB8P17481 243 aaPredicted RBP24.48■■□□□ 1.51
CPNE1-202ENST00000352393 RPL10P27635 214 aaKnown RBP24.48■■□□□ 1.51
CPNE1-202ENST00000352393 CAPRIN1Q14444 709 aaKnown RBP24.48■■□□□ 1.51
CPNE1-202ENST00000352393 SPATS1Q496A3 300 aa24.48■■□□□ 1.51
CPNE1-202ENST00000352393 RAB44Q7Z6P3 723 aaPredicted RBP24.48■■□□□ 1.51
CPNE1-202ENST00000352393 RHEBL1Q8TAI7 183 aa24.48■■□□□ 1.51
CPNE1-202ENST00000352393 ADAMTS16Q8TE57 1224 aa24.48■■□□□ 1.51
CPNE1-202ENST00000352393 SLC39A13Q96H72 371 aa24.48■■□□□ 1.51
CPNE1-202ENST00000352393 ATOH8Q96SQ7 321 aa24.48■■□□□ 1.51
CPNE1-202ENST00000352393 SP110Q9HB58 689 aa24.48■■□□□ 1.51
CPNE1-202ENST00000352393 POPDC3Q9HBV1 291 aa24.48■■□□□ 1.51
CPNE1-202ENST00000352393 LOC285095A0A1B0GVY8 99 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 TTC24A2A3L6 582 aaPredicted RBP24.47■■□□□ 1.51
CPNE1-202ENST00000352393 ARPC2O15144 300 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 CHRM3P20309 590 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 IL10P22301 178 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 FASP25445 335 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 OXTRP30559 389 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 CCT8P50990 548 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 YBX1P67809 324 aaKnown RBP24.47■■□□□ 1.51
CPNE1-202ENST00000352393 TSPY1Q01534 308 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 PGBD5Q8N414 524 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 GPR150Q8NGU9 434 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 RSPH1Q8WYR4 309 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 GFM2Q969S9 779 aaKnown RBP24.47■■□□□ 1.51
CPNE1-202ENST00000352393 TBATAQ96M53 351 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 NSUN5Q96P11 429 aaKnown RBP24.47■■□□□ 1.51
CPNE1-202ENST00000352393 KCNA7Q96RP8 456 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 C9orf16Q9BUW7 83 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 TMEM248Q9NWD8 314 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 GID8Q9NWU2 228 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 POLG2Q9UHN1 485 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 FAM149AA5PLN7 773 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 C9JVG2 144 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 POMCP01189 267 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 LBPP18428 481 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 GRIK1P39086 918 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 MERTKQ12866 999 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 MAP2K5Q13163 448 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 SLC36A3Q495N2 470 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 SPRED1Q7Z699 444 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 SPATA2LQ8IUW3 424 aaPredicted RBP24.47■■□□□ 1.51
CPNE1-202ENST00000352393 DDIASQ8IXT1 998 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 RYBPQ8N488 228 aaPredicted RBP24.47■■□□□ 1.51
CPNE1-202ENST00000352393 PSMG2Q969U7 264 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 LRRC58Q96CX6 371 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 CENPNQ96H22 339 aaPredicted RBP24.47■■□□□ 1.51
CPNE1-202ENST00000352393 PHF12Q96QT6 1004 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 TLR6Q9Y2C9 796 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 PCDHA9Q9Y5H5 950 aa24.47■■□□□ 1.51
CPNE1-202ENST00000352393 GBF1Q92538 1859 aa24.46■■□□□ 1.51
CPNE1-202ENST00000352393 H3BMM5 538 aa24.46■■□□□ 1.51
CPNE1-202ENST00000352393 GOT2P00505 430 aaKnown RBP24.46■■□□□ 1.51
CPNE1-202ENST00000352393 CTSHP09668 335 aa24.46■■□□□ 1.51
CPNE1-202ENST00000352393 SEMA3AQ14563 771 aa24.46■■□□□ 1.51
CPNE1-202ENST00000352393 PFKFB4Q16877 469 aa24.46■■□□□ 1.51
CPNE1-202ENST00000352393 GEN1Q17RS7 908 aa24.46■■□□□ 1.51
CPNE1-202ENST00000352393 TTC33Q6PID6 262 aaPredicted RBP24.46■■□□□ 1.51
CPNE1-202ENST00000352393 BLOC1S3Q6QNY0 202 aa24.46■■□□□ 1.51
CPNE1-202ENST00000352393 GPR141Q7Z602 305 aa24.46■■□□□ 1.51
CPNE1-202ENST00000352393 CMTR2Q8IYT2 770 aaKnown RBP24.46■■□□□ 1.51
CPNE1-202ENST00000352393 ZNF786Q8N393 782 aa24.46■■□□□ 1.51
CPNE1-202ENST00000352393 ZYG11BQ9C0D3 744 aa24.46■■□□□ 1.51
CPNE1-202ENST00000352393 ZNF701M0R085 212 aaPredicted RBP24.46■■□□□ 1.51
CPNE1-202ENST00000352393 C7P10643 843 aa24.46■■□□□ 1.51
CPNE1-202ENST00000352393 GFAPP14136 432 aa24.46■■□□□ 1.51
CPNE1-202ENST00000352393 ADARP55265 1226 aaKnown RBP24.46■■□□□ 1.51
CPNE1-202ENST00000352393 FSCN1Q16658 493 aaKnown RBP24.46■■□□□ 1.51
CPNE1-202ENST00000352393 ZBED5Q49AG3 693 aa24.46■■□□□ 1.51
CPNE1-202ENST00000352393 ALFQ53S48 1182 aa24.46■■□□□ 1.51
CPNE1-202ENST00000352393 MSANTD2Q6P1R3 559 aa24.46■■□□□ 1.51
CPNE1-202ENST00000352393 THEM5Q8N1Q8 247 aa24.46■■□□□ 1.51
CPNE1-202ENST00000352393 TUBGCP3Q96CW5 907 aa24.46■■□□□ 1.51
CPNE1-202ENST00000352393 TFB2MQ9H5Q4 396 aaKnown RBP24.46■■□□□ 1.51
CPNE1-202ENST00000352393 CD3EAPO15446 510 aaKnown RBP24.45■■□□□ 1.5
CPNE1-202ENST00000352393 CNTN5O94779 1100 aa24.45■■□□□ 1.5
CPNE1-202ENST00000352393 RASAL1O95294 804 aa24.45■■□□□ 1.5
CPNE1-202ENST00000352393 GLP2RO95838 553 aa24.45■■□□□ 1.5
CPNE1-202ENST00000352393 GPIP06744 558 aa24.45■■□□□ 1.5
CPNE1-202ENST00000352393 HGFP14210 728 aa24.45■■□□□ 1.5
CPNE1-202ENST00000352393 IDO1P14902 403 aa24.45■■□□□ 1.5
CPNE1-202ENST00000352393 PEX13Q92968 403 aa24.45■■□□□ 1.5
CPNE1-202ENST00000352393 TMEM125Q96AQ2 219 aa24.45■■□□□ 1.5
CPNE1-202ENST00000352393 ISOC1Q96CN7 298 aa24.45■■□□□ 1.5
CPNE1-202ENST00000352393 TRIM54Q9BYV2 358 aa24.45■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms