RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 UBE2Q1Q7Z7E8 422 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 TMC8Q8IU68 726 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 SPNS2Q8IVW8 549 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 DDI1Q8WTU0 396 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 ACDQ96AP0 544 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 CLPTM1LQ96KA5 538 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 ZBED2Q9BTP6 218 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 DERL2Q9GZP9 239 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 POLR3BQ9NW08 1133 aaPredicted RBP16.65■□□□□ 0.26
SAMM50-201ENST00000350028 FKBPLQ9UIM3 349 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 FCF1Q9Y324 198 aaKnown RBP16.65■□□□□ 0.26
SAMM50-201ENST00000350028 DENND4CQ5VZ89 1909 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 TRAV19A0A0A6YYK7 116 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.65■□□□□ 0.26
SAMM50-201ENST00000350028 SCAMP3O14828 347 aaKnown RBP16.65■□□□□ 0.26
SAMM50-201ENST00000350028 KRT36O76013 467 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 JUNP05412 331 aaKnown RBP16.65■□□□□ 0.26
SAMM50-201ENST00000350028 CKMP06732 381 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 ACRP10323 421 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 PKMP14618 531 aaKnown RBP16.65■□□□□ 0.26
SAMM50-201ENST00000350028 CSNK1DP48730 415 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 CLCN4P51793 760 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 PLK1P53350 603 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 EPHB1P54762 984 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 RPL26P61254 145 aaKnown RBP16.65■□□□□ 0.26
SAMM50-201ENST00000350028 HERVK_113P63132 956 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 BTKQ06187 659 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 RAD51Q06609 339 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 UNC50Q53HI1 259 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 ARMC12Q5T9G4 340 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 RIPOR1Q6ZS17 1223 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 METTL3Q86U44 580 aaKnown RBP16.65■□□□□ 0.26
SAMM50-201ENST00000350028 HS6ST3Q8IZP7 471 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 ELMOD1Q8N336 334 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 RYBPQ8N488 228 aaPredicted RBP16.65■□□□□ 0.26
SAMM50-201ENST00000350028 FIBCD1Q8N539 461 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 NKAPQ8N5F7 415 aaKnown RBP16.65■□□□□ 0.26
SAMM50-201ENST00000350028 MAB21L3Q8N8X9 362 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 STAG3L4Q8TBR4 150 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 WFDC5Q8TCV5 224 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 KCNV2Q8TDN2 545 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 KIAA1191Q96A73 305 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 GCNAQ96QF7 691 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 SMIM14Q96QK8 99 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 PANX3Q96QZ0 392 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 ERVK-6Q9BXR3 956 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 MEAF6Q9HAF1 191 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 MAGEE1Q9HCI5 957 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 CFAP97Q9P2B7 532 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 STX18Q9P2W9 335 aaKnown RBP16.65■□□□□ 0.26
SAMM50-201ENST00000350028 MCM8Q9UJA3 840 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 COMMD10Q9Y6G5 202 aa16.65■□□□□ 0.26
SAMM50-201ENST00000350028 LCHNA4D1U4 455 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 TMEM233B4DJY2 109 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 VPS26AO75436 327 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 SUPT7LO94864 414 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 CXCL14O95715 111 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 MAPK8P45983 427 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 INHBCP55103 352 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 SLC34A1Q06495 639 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 CYLC2Q14093 348 aaPredicted RBP16.64■□□□□ 0.25
SAMM50-201ENST00000350028 PTPRNQ16849 979 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 ZRANB3Q5FWF4 1079 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 C1orf146Q5VVC0 180 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 PAQR3Q6TCH7 311 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 APCDD1Q8J025 514 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 CATSPER2Q96P56 530 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 ATOH8Q96SQ7 321 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 KIAA1522Q9P206 1035 aaPredicted RBP16.64■□□□□ 0.25
SAMM50-201ENST00000350028 G3BP2Q9UN86 482 aaKnown RBP16.64■□□□□ 0.25
SAMM50-201ENST00000350028 ZNF711Q9Y462 761 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 TRAF6Q9Y4K3 522 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 PCDHB9Q9Y5E1 797 aa16.64■□□□□ 0.25
SAMM50-201ENST00000350028 OAS3Q9Y6K5 1087 aaKnown RBP16.64■□□□□ 0.25
SAMM50-201ENST00000350028 CCDC189A1A4V9 331 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 FKBP6O75344 327 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 PGLSO95336 258 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 ADH1AP07327 375 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 PTDSS1P48651 473 aaKnown RBP16.63■□□□□ 0.25
SAMM50-201ENST00000350028 PEX6Q13608 980 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 OR4D1Q15615 310 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 SETMARQ53H47 684 aaPredicted RBP16.63■□□□□ 0.25
SAMM50-201ENST00000350028 ATXN7L2Q5T6C5 722 aaPredicted RBP16.63■□□□□ 0.25
SAMM50-201ENST00000350028 TLDC1Q6P9B6 456 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 C16orf89Q6UX73 402 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 SNX32Q86XE0 403 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 MYLK4Q86YV6 388 aaPredicted RBP16.63■□□□□ 0.25
SAMM50-201ENST00000350028 DEFB107AQ8IZN7 70 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 PTGR2Q8N8N7 351 aaPredicted RBP16.63■□□□□ 0.25
SAMM50-201ENST00000350028 FIBINQ8TAL6 211 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 MYO19Q96H55 970 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 C19orf43Q9BQ61 176 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 TMEM106CQ9BVX2 250 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 IL23AQ9NPF7 189 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 IL17CQ9P0M4 197 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 MED16Q9Y2X0 877 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 PKP3Q9Y446 797 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 MTF2Q9Y483 593 aaPredicted RBP16.63■□□□□ 0.25
SAMM50-201ENST00000350028 LRRC42Q9Y546 428 aa16.63■□□□□ 0.25
SAMM50-201ENST00000350028 GBF1Q92538 1859 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms