RNA–Protein interactions for RNA: ENST00000346436.10

CLCN6-202, Transcript of chloride voltage-gated channel 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLCN6, Length 5,583 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-202ENST00000346436 ATAD1Q8NBU5 361 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 ASB2Q96Q27 587 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 EBF4Q9BQW3 602 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 NIFKQ9BYG3 293 aaKnown RBP10.88□□□□□ -0.67
CLCN6-202ENST00000346436 PRKAG3Q9UGI9 489 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 CD207Q9UJ71 328 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 CORO1CQ9ULV4 474 aaPredicted RBP10.88□□□□□ -0.67
CLCN6-202ENST00000346436 TOP3BO95985 862 aaKnown RBP10.88□□□□□ -0.67
CLCN6-202ENST00000346436 SERPINA6P08185 405 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 HNRNPA1P09651 372 aaKnown RBP eCLIP10.88□□□□□ -0.67
CLCN6-202ENST00000346436 HNRNPLP14866 589 aaKnown RBP eCLIP10.88□□□□□ -0.674e-10■■■□□ 15.1
CLCN6-202ENST00000346436 ALAS2P22557 587 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 ASPAP45381 313 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 GRB14Q14449 540 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 CCL14Q16627 93 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 PARP15Q460N3 678 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 C2orf27AQ580R0 203 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 SDHAF4Q5VUM1 108 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 SCARA3Q6AZY7 606 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 DHDDSQ86SQ9 333 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 ZNF784Q8NCA9 323 aaPredicted RBP10.88□□□□□ -0.67
CLCN6-202ENST00000346436 ALKBH4Q9NXW9 302 aa10.88□□□□□ -0.67
CLCN6-202ENST00000346436 MAFBQ9Y5Q3 323 aaPredicted RBP10.88□□□□□ -0.67
CLCN6-202ENST00000346436 CXorf49A8MYA2 514 aaPredicted RBP10.87□□□□□ -0.67
CLCN6-202ENST00000346436 FGF18O76093 207 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 ZNF23P17027 643 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 CMPK1P30085 196 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 ZBTB17Q13105 803 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 FASTKQ14296 549 aaKnown RBP10.87□□□□□ -0.67
CLCN6-202ENST00000346436 NR6A1Q15406 480 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 CHRDL2Q6WN34 429 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 TWNKQ96RR1 684 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 SEPHS2Q99611 448 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 RSPH9Q9H1X1 276 aaPredicted RBP10.87□□□□□ -0.67
CLCN6-202ENST00000346436 MORF4L1Q9UBU8 362 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 ZNF112Q9UJU3 913 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 C16orf96A6NNT2 1141 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 TIPRLO75663 272 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 RPL14P50914 215 aaKnown RBP10.87□□□□□ -0.67
CLCN6-202ENST00000346436 GDF6Q6KF10 455 aaPredicted RBP10.87□□□□□ -0.67
CLCN6-202ENST00000346436 MILR1Q7Z6M3 343 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 ANKRD49Q8WVL7 239 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 ZNF670Q9BS34 389 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 NTPCRQ9BSD7 190 aaKnown RBP10.87□□□□□ -0.67
CLCN6-202ENST00000346436 DCUN1D5Q9BTE7 237 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 A0A1B0GVM2 712 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 ATP6AP2A0A1C7CYW4 349 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 TCAF2A6NFQ2 919 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 MFSD11O43934 449 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 ATP6AP2O75787 350 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 TNFP01375 233 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 CCNYL3P0C7X3 344 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 GJA9P57773 515 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 STX4Q12846 297 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 NEK5Q6P3R8 708 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 CRTC3Q6UUV7 619 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 CYP2U1Q7Z449 544 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 PSTKQ8IV42 348 aaKnown RBP10.87□□□□□ -0.67
CLCN6-202ENST00000346436 MIER2Q8N344 545 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 MOSPD2Q8NHP6 518 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 RCN3Q96D15 328 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 KCTD15Q96SI1 283 aaPredicted RBP10.87□□□□□ -0.67
CLCN6-202ENST00000346436 HPS4Q9NQG7 708 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 KCNE2Q9Y6J6 123 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 C1RP00736 705 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 ADH5P11766 374 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 LPOP22079 712 aaPredicted RBP10.87□□□□□ -0.67
CLCN6-202ENST00000346436 ACSBG2Q5FVE4 666 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 RAVER1Q8IY67 606 aaKnown RBP10.87□□□□□ -0.67
CLCN6-202ENST00000346436 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.87□□□□□ -0.67
CLCN6-202ENST00000346436 PKD1L3Q7Z443 1732 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 ARL5CA6NH57 179 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 TK2O00142 265 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 WFS1O76024 890 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 PCCBP05166 539 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 GSTM1P09488 218 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 FAM58BPP0C7Q3 252 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 ME2P23368 584 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 PRKAA2P54646 552 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 YBEYP58557 167 aaPredicted RBP10.87□□□□□ -0.67
CLCN6-202ENST00000346436 MRPS5P82675 430 aaKnown RBP10.87□□□□□ -0.67
CLCN6-202ENST00000346436 ZNF852Q6ZMS4 543 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 LIX1Q8N485 282 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 ZNF570Q96NI8 536 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 CSPG4P5Q96PW8 444 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 IMPAD1Q9NX62 359 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 TAS2R1Q9NYW7 299 aa10.87□□□□□ -0.67
CLCN6-202ENST00000346436 SLC38A8A6NNN8 435 aa10.86□□□□□ -0.67
CLCN6-202ENST00000346436 FAM220BPB1ANY3 271 aa10.86□□□□□ -0.67
CLCN6-202ENST00000346436 SERPINI2O75830 405 aa10.86□□□□□ -0.67
CLCN6-202ENST00000346436 TM7SF2O76062 418 aa10.86□□□□□ -0.67
CLCN6-202ENST00000346436 HOXB2P14652 356 aa10.86□□□□□ -0.67
CLCN6-202ENST00000346436 ERCC2P18074 760 aa10.86□□□□□ -0.67
CLCN6-202ENST00000346436 MPSTP25325 297 aa10.86□□□□□ -0.67
CLCN6-202ENST00000346436 TIE1P35590 1138 aa10.86□□□□□ -0.67
CLCN6-202ENST00000346436 GABRB2P47870 512 aa10.86□□□□□ -0.67
CLCN6-202ENST00000346436 P3H2Q8IVL5 708 aa10.86□□□□□ -0.67
CLCN6-202ENST00000346436 COL26A1Q96A83 441 aa10.86□□□□□ -0.67
CLCN6-202ENST00000346436 ZHX1-C8orf76Q96EF9 292 aa10.86□□□□□ -0.67
CLCN6-202ENST00000346436 FBXL18Q96ME1 805 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms