RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 Q6ZVU0 165 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 APCDD1Q8J025 514 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 FIBCD1Q8N539 461 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 EEF1AKMT1Q8WVE0 214 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 MRPL57Q9BQC6 102 aaKnown RBP13.28□□□□□ -0.28
CASC4-202ENST00000345795 PRKD2Q9BZL6 878 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 SPTBN2O15020 2390 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 FFAR2O15552 330 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 CLASP2O75122 1294 aaKnown RBP13.28□□□□□ -0.28
CASC4-202ENST00000345795 TIPRLO75663 272 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 SLC25A14O95258 325 aaPredicted RBP13.28□□□□□ -0.28
CASC4-202ENST00000345795 IL2P60568 153 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 RETSATQ6NUM9 610 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 TRIM74Q86UV6 250 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 CENPLQ8N0S6 344 aaPredicted RBP13.28□□□□□ -0.28
CASC4-202ENST00000345795 TRIML2Q8N7C3 387 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 PXYLP1Q8TE99 480 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 SKA1Q96BD8 255 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 Q9Y3F1 56 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 PRKAB1Q9Y478 270 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 WNT6Q9Y6F9 365 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 U3KQV3 271 aa13.28□□□□□ -0.28
CASC4-202ENST00000345795 LUC7L3O95232 432 aaKnown RBP13.27□□□□□ -0.28
CASC4-202ENST00000345795 LMNAP02545 664 aaKnown RBP13.27□□□□□ -0.28
CASC4-202ENST00000345795 KLKB1P03952 638 aa13.27□□□□□ -0.28
CASC4-202ENST00000345795 LPOP22079 712 aaPredicted RBP13.27□□□□□ -0.28
CASC4-202ENST00000345795 KCNK10P57789 538 aa13.27□□□□□ -0.28
CASC4-202ENST00000345795 GPR17Q13304 367 aa13.27□□□□□ -0.28
CASC4-202ENST00000345795 MTX3Q5HYI7 312 aa13.27□□□□□ -0.28
CASC4-202ENST00000345795 BBS7Q8IWZ6 715 aa13.27□□□□□ -0.28
CASC4-202ENST00000345795 BEND7Q8N7W2 519 aaPredicted RBP13.27□□□□□ -0.28
CASC4-202ENST00000345795 ACMSDQ8TDX5 336 aa13.27□□□□□ -0.28
CASC4-202ENST00000345795 IRGQQ8WZA9 623 aa13.27□□□□□ -0.28
CASC4-202ENST00000345795 CIB1Q99828 191 aa13.27□□□□□ -0.28
CASC4-202ENST00000345795 C17orf80Q9BSJ5 609 aa13.27□□□□□ -0.28
CASC4-202ENST00000345795 BOCQ9BWV1 1114 aa13.27□□□□□ -0.28
CASC4-202ENST00000345795 MRPL9Q9BYD2 267 aaKnown RBP13.27□□□□□ -0.28
CASC4-202ENST00000345795 OSGEPL1Q9H4B0 414 aa13.27□□□□□ -0.28
CASC4-202ENST00000345795 OXSMQ9NWU1 459 aa13.27□□□□□ -0.28
CASC4-202ENST00000345795 ARL15Q9NXU5 204 aa13.27□□□□□ -0.28
CASC4-202ENST00000345795 VPS4AQ9UN37 437 aa13.27□□□□□ -0.28
CASC4-202ENST00000345795 SCML2Q9UQR0 700 aa13.27□□□□□ -0.28
CASC4-202ENST00000345795 BIRC5O15392 142 aa13.27□□□□□ -0.29
CASC4-202ENST00000345795 TYMPP19971 482 aa13.27□□□□□ -0.29
CASC4-202ENST00000345795 PRDX3P30048 256 aaKnown RBP13.27□□□□□ -0.29
CASC4-202ENST00000345795 DIO3P55073 304 aa13.27□□□□□ -0.29
CASC4-202ENST00000345795 PIANPQ8IYJ0 282 aa13.27□□□□□ -0.29
CASC4-202ENST00000345795 KLK6Q92876 244 aa13.27□□□□□ -0.29
CASC4-202ENST00000345795 TCF25Q9BQ70 676 aa13.27□□□□□ -0.29
CASC4-202ENST00000345795 OSBPL2Q9H1P3 480 aa13.27□□□□□ -0.29
CASC4-202ENST00000345795 CYLDQ9NQC7 956 aa13.27□□□□□ -0.29
CASC4-202ENST00000345795 POMPQ9Y244 141 aa13.27□□□□□ -0.29
CASC4-202ENST00000345795 TRPC5OSA6NMA1 111 aa13.27□□□□□ -0.29
CASC4-202ENST00000345795 NDST3O95803 873 aa13.27□□□□□ -0.29
CASC4-202ENST00000345795 PPARGP37231 505 aaPredicted RBP13.27□□□□□ -0.29
CASC4-202ENST00000345795 FOXA1P55317 472 aa13.27□□□□□ -0.29
CASC4-202ENST00000345795 RPL38P63173 70 aaKnown RBP13.27□□□□□ -0.29
CASC4-202ENST00000345795 SYTL3Q4VX76 610 aa13.27□□□□□ -0.29
CASC4-202ENST00000345795 PGBD5Q8N414 524 aa13.27□□□□□ -0.29
CASC4-202ENST00000345795 GPR156Q8NFN8 814 aa13.27□□□□□ -0.29
CASC4-202ENST00000345795 FIG4Q92562 907 aa13.27□□□□□ -0.29
CASC4-202ENST00000345795 SCAMP4Q969E2 229 aa13.27□□□□□ -0.29
CASC4-202ENST00000345795 NOL11Q9H8H0 719 aaKnown RBP13.27□□□□□ -0.29
CASC4-202ENST00000345795 COPG1Q9Y678 874 aaKnown RBP13.27□□□□□ -0.29
CASC4-202ENST00000345795 STATHP02808 62 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 KCNC1P48547 511 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 TRMT5Q32P41 509 aaKnown RBP13.26□□□□□ -0.29
CASC4-202ENST00000345795 C16orf89Q6UX73 402 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 RD3Q7Z3Z2 195 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 FAXDC2Q96IV6 333 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 TSSK3Q96PN8 268 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 MYO1GB0I1T2 1018 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 AP3B1O00203 1094 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 PLK4O00444 970 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 SEC22BO75396 215 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 APOA4P06727 396 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 HIST1H2AGP0C0S8 130 aaPredicted RBP13.26□□□□□ -0.29
CASC4-202ENST00000345795 HIST1H2ADP20671 130 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 ITGALP20701 1170 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 CDK7P50613 346 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 NEK2P51955 445 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 PSME3P61289 254 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 RARS2Q5T160 578 aaKnown RBP13.26□□□□□ -0.29
CASC4-202ENST00000345795 NADSYN1Q6IA69 706 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 MSANTD2Q6P1R3 559 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 ZYG11AQ6WRX3 759 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 TSPAN33Q86UF1 283 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 CILP2Q8IUL8 1156 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 SNX19Q92543 992 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 RTP4Q96DX8 246 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 HIST1H2AHQ96KK5 128 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 SORT1Q99523 831 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 TSC22D3Q99576 134 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 PRPF18Q99633 342 aaKnown RBP13.26□□□□□ -0.29
CASC4-202ENST00000345795 GPR22Q99680 433 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 HIST1H2AJQ99878 128 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 H2AFJQ9BTM1 129 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 DHRS4Q9BTZ2 278 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 MAF1Q9H063 256 aa13.26□□□□□ -0.29
CASC4-202ENST00000345795 F8W8V4 182 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms