RNA–Protein interactions for RNA: ENST00000345005.8

CLK3-201, Transcript of CDC like kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK3, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-201ENST00000345005 NSMCE3Q96MG7 304 aa12.82□□□□□ -0.36
CLK3-201ENST00000345005 ABCB8Q9NUT2 735 aa12.82□□□□□ -0.36
CLK3-201ENST00000345005 ANKRD6Q9Y2G4 727 aa12.82□□□□□ -0.36
CLK3-201ENST00000345005 YBX2Q9Y2T7 364 aaKnown RBP12.82□□□□□ -0.36
CLK3-201ENST00000345005 FCF1Q9Y324 198 aaKnown RBP12.82□□□□□ -0.36
CLK3-201ENST00000345005 MRPS23Q9Y3D9 190 aaKnown RBP12.82□□□□□ -0.36
CLK3-201ENST00000345005 PCDHGC4Q9Y5F7 938 aa12.82□□□□□ -0.36
CLK3-201ENST00000345005 SZT2Q5T011 3432 aa12.82□□□□□ -0.36
CLK3-201ENST00000345005 A0A088AWK7 358 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 A0A096LPK6 155 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 ANKRD66B4E2M5 251 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 SLC9A3R1O14745 358 aaPredicted RBP12.81□□□□□ -0.36
CLK3-201ENST00000345005 MT-CO1P00395 513 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 PRLP01236 227 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 SERPINE1P05121 402 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 GABRB3P28472 473 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 CD70P32970 193 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 CPOXP36551 454 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 MAPK8P45983 427 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 CD151P48509 253 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 ALDH18A1P54886 795 aaKnown RBP12.81□□□□□ -0.36
CLK3-201ENST00000345005 USP10Q14694 798 aaKnown RBP12.81□□□□□ -0.36
CLK3-201ENST00000345005 GRM3Q14832 879 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 TAF1AQ15573 450 aaPredicted RBP12.81□□□□□ -0.36
CLK3-201ENST00000345005 ZNF77Q15935 545 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 CNPY1Q3B7I2 92 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 N4BP2L1Q5TBK1 243 aaPredicted RBP12.81□□□□□ -0.36
CLK3-201ENST00000345005 METTL21CQ5VZV1 264 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 PGM2L1Q6PCE3 622 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 CMC1Q7Z7K0 106 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 TRIM74Q86UV6 250 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 TRIM73Q86UV7 250 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 LCA5Q86VQ0 697 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 TMEM25Q86YD3 366 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 KBTBD2Q8IY47 623 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 SMG7Q92540 1137 aaKnown RBP12.81□□□□□ -0.36
CLK3-201ENST00000345005 IRF7Q92985 503 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 SERPINI1Q99574 410 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 CIDEBQ9UHD4 219 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 TLK1Q9UKI8 766 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 SLC39A10Q9ULF5 831 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 CLEC4EQ9ULY5 219 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.81□□□□□ -0.36
CLK3-201ENST00000345005 C2orf81A6NN90 581 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 PRR5-ARHGAP8B1AHC4 643 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 CASQ2O14958 399 aaPredicted RBP12.81□□□□□ -0.36
CLK3-201ENST00000345005 BUD23O43709 281 aaKnown RBP12.81□□□□□ -0.36
CLK3-201ENST00000345005 H2AFYO75367 372 aaKnown RBP12.81□□□□□ -0.36
CLK3-201ENST00000345005 RPP40O75818 363 aaKnown RBP12.81□□□□□ -0.36
CLK3-201ENST00000345005 UBTFL6P0CB48 400 aaPredicted RBP12.81□□□□□ -0.36
CLK3-201ENST00000345005 ABCG1P45844 678 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 LEPRP48357 1165 aaKnown RBP12.81□□□□□ -0.36
CLK3-201ENST00000345005 HK2P52789 917 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 ARHGAP8P85298 464 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 MPP1Q00013 466 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 USP4Q13107 963 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 CCDC153Q494R4 210 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 PPM1JQ5JR12 505 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 FOXB2Q5VYV0 432 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 ADGRD2Q7Z7M1 963 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 ICA1LQ8NDH6 482 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 LPCAT1Q8NF37 534 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 PRR11Q96HE9 360 aaPredicted RBP12.81□□□□□ -0.36
CLK3-201ENST00000345005 LMLNQ96KR4 655 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 ZSWIM3Q96MP5 696 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 BBS2Q9BXC9 721 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 SPHK2Q9NRA0 654 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 C6orf203Q9P0P8 240 aaPredicted RBP12.81□□□□□ -0.36
CLK3-201ENST00000345005 KCTD3Q9Y597 815 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 ARL5AQ9Y689 179 aa12.81□□□□□ -0.36
CLK3-201ENST00000345005 FAM95CA0A1B0GW59 222 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 PLIN3O60664 434 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 PAPLNO95428 1278 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 PRAMEF12O95522 483 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 GLP2RO95838 553 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 C2P06681 752 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 COL6A2P12110 1019 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 ALOX15P16050 662 aaPredicted RBP12.8□□□□□ -0.36
CLK3-201ENST00000345005 CEBPBP17676 345 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 WEE1P30291 646 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 CPA2P48052 419 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 POU4F1Q01851 419 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 TRAF2Q12933 501 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 LSAMPQ13449 338 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 ADRM1Q16186 407 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 DUSP6Q16828 381 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 HSF5Q4G112 596 aaPredicted RBP12.8□□□□□ -0.36
CLK3-201ENST00000345005 FASTKD1Q53R41 847 aaKnown RBP12.8□□□□□ -0.36
CLK3-201ENST00000345005 PITRM1Q5JRX3 1037 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 CFAP157Q5JU67 520 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 RAPH1Q70E73 1250 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 GLT6D1Q7Z4J2 308 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 PTAR1Q7Z6K3 402 aaPredicted RBP12.8□□□□□ -0.36
CLK3-201ENST00000345005 CLEC14AQ86T13 490 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 CILP2Q8IUL8 1156 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 KIAA1958Q8N8K9 716 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 GPR150Q8NGU9 434 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 RIN3Q8TB24 985 aa12.8□□□□□ -0.36
CLK3-201ENST00000345005 PDCD6IPQ8WUM4 868 aaKnown RBP12.8□□□□□ -0.36
CLK3-201ENST00000345005 STON2Q8WXE9 905 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms