RNA–Protein interactions for RNA: ENST00000343599.5

ZNF540-202, Transcript of zinc finger protein 540, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ZNF540, Length 3,073 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-202ENST00000343599 NEMP2A6NFY4 417 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 FAM25EA8MYX2 175 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 C1QTNF3-AMACRE9PGA6 284 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 GSC2O15499 205 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 AQP9O43315 295 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 CALUO43852 315 aaPredicted RBP7.34□□□□□ -1.23
ZNF540-202ENST00000343599 IGHV4-34P06331 123 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 RARGP13631 454 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 TPMTP51580 245 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 THOP1P52888 689 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 ATXN3P54252 364 aaPredicted RBP7.34□□□□□ -1.23
ZNF540-202ENST00000343599 RPL6Q02878 288 aaKnown RBP7.34□□□□□ -1.23
ZNF540-202ENST00000343599 ELAVL3Q14576 367 aaKnown RBP7.34□□□□□ -1.23
ZNF540-202ENST00000343599 HLA-BQ31612 363 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 BHLHA9Q7RTU4 235 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 SLCO6A1Q86UG4 719 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 PSTKQ8IV42 348 aaKnown RBP7.34□□□□□ -1.23
ZNF540-202ENST00000343599 SMYD4Q8IYR2 804 aaPredicted RBP7.34□□□□□ -1.23
ZNF540-202ENST00000343599 LSMEM1Q8N8F7 131 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 DEFB124Q8NES8 71 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 LILRB1Q8NHL6 650 aaPredicted RBP7.34□□□□□ -1.23
ZNF540-202ENST00000343599 WDR36Q8NI36 951 aaKnown RBP7.34□□□□□ -1.23
ZNF540-202ENST00000343599 PPP1R13LQ8WUF5 828 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 FMO2Q99518 471 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 CPEB1Q9BZB8 566 aaKnown RBP7.34□□□□□ -1.23
ZNF540-202ENST00000343599 KLK14Q9P0G3 267 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 DOLKQ9UPQ8 538 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 GINS2Q9Y248 185 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 KCTD3Q9Y597 815 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 AK5Q9Y6K8 562 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 SLC16A4O15374 487 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 EXOC3O60645 756 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 STC2O76061 302 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 CBX6O95503 412 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 SEMA4FO95754 770 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 CLPTM1O96005 669 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 LIPCP11150 499 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 NME1P15531 152 aaKnown RBP7.34□□□□□ -1.23
ZNF540-202ENST00000343599 AGAP20933 346 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 RAP1GDS1P52306 607 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 CENPCQ03188 943 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 TUBA3CQ13748 450 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 KCNJ8Q15842 424 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 ASTE1Q2TB18 679 aaPredicted RBP7.34□□□□□ -1.23
ZNF540-202ENST00000343599 KCTD21Q4G0X4 260 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 FCRL6Q6DN72 434 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 RWDD4Q6NW29 188 aaKnown RBP7.34□□□□□ -1.23
ZNF540-202ENST00000343599 C16orf54Q6UWD8 224 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 LCLAT1Q6UWP7 414 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 GPBP1Q86WP2 473 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 OR6Y1Q8NGX8 325 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 SUN5Q8TC36 379 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 PPP1R16AQ96I34 528 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 TUBB6Q9BUF5 446 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 ROPN1BQ9BZX4 212 aaPredicted RBP7.34□□□□□ -1.23
ZNF540-202ENST00000343599 ROPN1Q9HAT0 212 aaPredicted RBP7.34□□□□□ -1.23
ZNF540-202ENST00000343599 TBC1D23Q9NUY8 699 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 SEPT10Q9P0V9 454 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 C5AR2Q9P296 337 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 GDAQ9Y2T3 454 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 CEPT1Q9Y6K0 416 aa7.34□□□□□ -1.23
ZNF540-202ENST00000343599 TMEM120BA0PK00 339 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 SCAMP1O15126 338 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 SUV39H1O43463 412 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 PALMO75781 387 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 ZWINTO95229 277 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 GAS8O95995 478 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 CYP1A2P05177 515 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 ABCB1P08183 1280 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 PLEKP08567 350 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 CD48P09326 243 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 GSTM1P09488 218 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 TMEM191BP0C7N4 346 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 CDH2P19022 906 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 HNRNPFP52597 415 aaKnown RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 ZFP36L1Q07352 338 aaKnown RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 LRRC14Q15048 493 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 PDK3Q15120 406 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 C15orf59Q2T9L4 293 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 ARHGEF18Q6ZSZ5 1173 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 LURAP1LQ8IV03 231 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 ATP6V0D2Q8N8Y2 350 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 GALNT11Q8NCW6 608 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 LILRB4Q8NHJ6 448 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 ING5Q8WYH8 240 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 ARHGEF2Q92974 986 aaKnown RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 PTCD3Q96EY7 689 aaKnown RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 PCED1BQ96HM7 432 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 SLC2A13Q96QE2 648 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 ACE2Q9BYF1 805 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 BTBD1Q9H0C5 482 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 TMLHEQ9NVH6 421 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 TRNAU1APQ9NX07 287 aaKnown RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 IFT52Q9Y366 437 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 WNT6Q9Y6F9 365 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 RGS13O14921 159 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 PGM3O95394 542 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 ENO2P09104 434 aaPredicted RBP7.33□□□□□ -1.24
ZNF540-202ENST00000343599 ALPIP09923 528 aa7.33□□□□□ -1.24
ZNF540-202ENST00000343599 VCLP18206 1134 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms