RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 TPRG1LQ5T0D9 272 aa18■□□□□ 0.47
USF2-202ENST00000343550 CDCP2Q5VXM1 449 aa18■□□□□ 0.47
USF2-202ENST00000343550 DENND2CQ68D51 928 aa18■□□□□ 0.47
USF2-202ENST00000343550 CDKL3Q8IVW4 592 aaPredicted RBP18■□□□□ 0.47
USF2-202ENST00000343550 LYSMD1Q96S90 227 aa18■□□□□ 0.47
USF2-202ENST00000343550 MLPHQ9BV36 600 aaPredicted RBP18■□□□□ 0.47
USF2-202ENST00000343550 ABCG4Q9H172 646 aa18■□□□□ 0.47
USF2-202ENST00000343550 CARD9Q9H257 536 aa18■□□□□ 0.47
USF2-202ENST00000343550 UBP1Q9NZI7 540 aa18■□□□□ 0.47
USF2-202ENST00000343550 R3HDM2Q9Y2K5 976 aaKnown RBP18■□□□□ 0.47
USF2-202ENST00000343550 SMG1Q96Q15 3661 aaKnown RBP18■□□□□ 0.47
USF2-202ENST00000343550 IGSF10Q6WRI0 2623 aa18■□□□□ 0.47
USF2-202ENST00000343550 TDRD6O60522 2096 aaKnown RBP18■□□□□ 0.47
USF2-202ENST00000343550 JUNDP17535 347 aa17.99■□□□□ 0.47
USF2-202ENST00000343550 PCSK7Q16549 785 aa17.99■□□□□ 0.47
USF2-202ENST00000343550 CDKN3Q16667 212 aa17.99■□□□□ 0.47
USF2-202ENST00000343550 SEL1L2Q5TEA6 688 aa17.99■□□□□ 0.47
USF2-202ENST00000343550 LRRC66Q68CR7 880 aa17.99■□□□□ 0.47
USF2-202ENST00000343550 ZCCHC8Q6NZY4 707 aaKnown RBP17.99■□□□□ 0.47
USF2-202ENST00000343550 TECPR1Q7Z6L1 1165 aa17.99■□□□□ 0.47
USF2-202ENST00000343550 PLA2G15Q8NCC3 412 aa17.99■□□□□ 0.47
USF2-202ENST00000343550 FERMT1Q9BQL6 677 aa17.99■□□□□ 0.47
USF2-202ENST00000343550 APOOQ9BUR5 198 aa17.99■□□□□ 0.47
USF2-202ENST00000343550 KCTD5Q9NXV2 234 aa17.99■□□□□ 0.47
USF2-202ENST00000343550 FAM153AQ9UHL3 310 aa17.99■□□□□ 0.47
USF2-202ENST00000343550 PCDHB1Q9Y5F3 818 aa17.99■□□□□ 0.47
USF2-202ENST00000343550 ASXL3Q9C0F0 2248 aa17.99■□□□□ 0.47
USF2-202ENST00000343550 CAPN8A6NHC0 703 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 KCNN4O15554 427 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 ZSCAN12O43309 604 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 AQP9O43315 295 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 PMPCBO75439 489 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 ZNF30P17039 623 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 ETV3P41162 512 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 EIF2B5Q13144 721 aaKnown RBP17.98■□□□□ 0.47
USF2-202ENST00000343550 GALNT3Q14435 633 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 TBC1D25Q3MII6 688 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 ANKRD20A2Q5SQ80 823 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 ANKRD20A1Q5TYW2 823 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 ANKRD20A3Q5VUR7 823 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 KDELC1Q6UW63 502 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 Q6ZVL8 140 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 SLC13A5Q86YT5 568 aaPredicted RBP17.98■□□□□ 0.47
USF2-202ENST00000343550 SLC35B2Q8TB61 432 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 IFI44Q8TCB0 444 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 LMX1AQ8TE12 382 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 OXNAD1Q96HP4 312 aaPredicted RBP17.98■□□□□ 0.47
USF2-202ENST00000343550 DEPDC7Q96QD5 511 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 NCKIPSDQ9NZQ3 722 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 LOC285095A0A1B0GVY8 99 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 CLDN7O95471 211 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 EPOP01588 193 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 PCCBP05166 539 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 TRIM23P36406 574 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 THOP1P52888 689 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 MTM1Q13496 603 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 PTK2BQ14289 1009 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 DEFB133Q30KQ1 61 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 PNCKQ6P2M8 343 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 RFLNAQ6ZTI6 216 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 PELI3Q8N2H9 469 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 BTN2A2Q8WVV5 523 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 DTD2Q96FN9 168 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 PRORYQ9H606 182 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 RSPH14Q9UHP6 348 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 DNPEPQ9ULA0 475 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 OR1A2Q9Y585 309 aa17.98■□□□□ 0.47
USF2-202ENST00000343550 FASNP49327 2511 aaKnown RBP17.97■□□□□ 0.47
USF2-202ENST00000343550 C5orf60A6NFR6 353 aa17.97■□□□□ 0.47
USF2-202ENST00000343550 EIF4E1BA6NMX2 242 aaKnown RBP17.97■□□□□ 0.47
USF2-202ENST00000343550 F5H423 210 aaPredicted RBP17.97■□□□□ 0.47
USF2-202ENST00000343550 TPP1O14773 563 aa17.97■□□□□ 0.47
USF2-202ENST00000343550 NDST3O95803 873 aa17.97■□□□□ 0.47
USF2-202ENST00000343550 WNT3AP56704 352 aa17.97■□□□□ 0.47
USF2-202ENST00000343550 ESRP1Q6NXG1 681 aaKnown RBP17.97■□□□□ 0.47
USF2-202ENST00000343550 MAPK15Q8TD08 544 aa17.97■□□□□ 0.47
USF2-202ENST00000343550 NUS1Q96E22 293 aa17.97■□□□□ 0.47
USF2-202ENST00000343550 MRGPRX2Q96LB1 330 aa17.97■□□□□ 0.47
USF2-202ENST00000343550 GBA3Q9H227 469 aa17.97■□□□□ 0.47
USF2-202ENST00000343550 MAGEE1Q9HCI5 957 aa17.97■□□□□ 0.47
USF2-202ENST00000343550 TRMT1Q9NXH9 659 aaKnown RBP17.97■□□□□ 0.47
USF2-202ENST00000343550 SPASTQ9UBP0 616 aa17.97■□□□□ 0.47
USF2-202ENST00000343550 CPED1A4D0V7 1026 aa17.96■□□□□ 0.47
USF2-202ENST00000343550 USP12O75317 370 aa17.96■□□□□ 0.47
USF2-202ENST00000343550 CSO75390 466 aaKnown RBP17.96■□□□□ 0.47
USF2-202ENST00000343550 ZNF189O75820 626 aaPredicted RBP17.96■□□□□ 0.47
USF2-202ENST00000343550 STK10O94804 968 aaKnown RBP17.96■□□□□ 0.47
USF2-202ENST00000343550 MPOP05164 745 aa17.96■□□□□ 0.47
USF2-202ENST00000343550 STC1P52823 247 aa17.96■□□□□ 0.47
USF2-202ENST00000343550 MPP3Q13368 585 aa17.96■□□□□ 0.47
USF2-202ENST00000343550 ITPRIPL1Q6GPH6 555 aa17.96■□□□□ 0.47
USF2-202ENST00000343550 CCDC70Q6NSX1 233 aa17.96■□□□□ 0.47
USF2-202ENST00000343550 RAVER1Q8IY67 606 aaKnown RBP17.96■□□□□ 0.47
USF2-202ENST00000343550 FAM71DQ8N9W8 422 aa17.96■□□□□ 0.47
USF2-202ENST00000343550 CCDC110Q8TBZ0 833 aa17.96■□□□□ 0.47
USF2-202ENST00000343550 SPATA13Q96N96 652 aa17.96■□□□□ 0.47
USF2-202ENST00000343550 UBL7Q96S82 380 aaPredicted RBP17.96■□□□□ 0.47
USF2-202ENST00000343550 GORASP1Q9BQQ3 440 aa17.96■□□□□ 0.47
USF2-202ENST00000343550 TMEM121Q9BTD3 319 aa17.96■□□□□ 0.47
USF2-202ENST00000343550 ABCG8Q9H221 673 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms