RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 GDAP2Q9NXN4 497 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 RCOR3Q9P2K3 495 aaPredicted RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 NAGPAQ9UK23 515 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 FAM208AQ9UK61 1670 aaKnown RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 PLXNA2O75051 1894 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 TRPM7Q96QT4 1865 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 SH3PXD2BA1X283 911 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 RIIAD1A6NNX1 92 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 CHURC1-FNTBB4DL54 471 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 KHNYNO15037 678 aaKnown RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 TNNI3P19429 210 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 RPL35P42766 123 aaKnown RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 CRADDP78560 199 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 FADDQ13158 208 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 MOGQ16653 247 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 VPS26BQ4G0F5 336 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 FBXO47Q5MNV8 452 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 SYDE2Q5VT97 1194 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 TRIM40Q6P9F5 258 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 FAM83HQ6ZRV2 1179 aaPredicted RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 CBWD2Q8IUF1 395 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 TAAR8Q969N4 342 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 C8orf48Q96LL4 319 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 KCTD7Q96MP8 289 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ACTR6Q9GZN1 396 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 PLEKHA1Q9HB21 404 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 TM9SF3Q9HD45 589 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ABCB9Q9NP78 766 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 GNG13Q9P2W3 67 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 CSADQ9Y600 493 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 FANCAO15360 1455 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 MUC4Q99102 2169 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 FCER1AP12319 257 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 SLC2A4P14672 509 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 PEX2P28328 305 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ADH6P28332 368 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 CRATP43155 626 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 MMP13P45452 471 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ALDH3B2P48448 385 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 CACNB3P54284 484 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 TOB2Q14106 344 aaPredicted RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 KCTD19Q17RG1 926 aaPredicted RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 DCAF6Q58WW2 860 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 DCST2Q5T1A1 773 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 CLNKQ7Z7G1 428 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 PAQR7Q86WK9 346 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 KAT5Q92993 513 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 USP7Q93009 1102 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 MALSU1Q96EH3 234 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 CENPNQ96H22 339 aaPredicted RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 FAM20AQ96MK3 541 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 RUSC1Q9BVN2 902 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 SLC39A8Q9C0K1 460 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 MALT1Q9UDY8 824 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 AGO2Q9UKV8 859 aaKnown RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 A0A087X0B3 334 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 HTR3EA5X5Y0 456 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 SNAPINO95295 136 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 MBP02144 154 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 MATN1P21941 496 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 S100A3P33764 101 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ASMTP46597 345 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 TIGD6Q17RP2 521 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ALG10Q5BKT4 473 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 LIPMQ5VYY2 423 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ATG9AQ7Z3C6 839 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 SEPT12Q8IYM1 358 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 SLC34A3Q8N130 599 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 RDH11Q8TC12 318 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ISOC1Q96CN7 298 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 RAD9AQ99638 391 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 C7orf50Q9BRJ6 194 aaKnown RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 ACTR10Q9NZ32 417 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 VPS51Q9UID3 782 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ERI2A8K979 691 aaKnown RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 ZNF208O43345 1280 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 SEC22BO75396 215 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 PIGRP01833 764 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 CSH1P0DML2 217 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 CSH2P0DML3 217 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 CYP11B1P15538 503 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 BMP7P18075 431 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 CYP3A5P20815 502 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 CCNFP41002 786 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 HARS2P49590 506 aaKnown RBP6.16□□□□□ -1.42
VCAN-203ENST00000343200 EFNA5P52803 228 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 DYRK1AQ13627 763 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 Q3C1V9 767 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 HYIQ5T013 277 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 GTF2IRD2BQ6EKJ0 949 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 GTF2IRD2Q86UP8 949 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 SCN4BQ8IWT1 228 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 FEZF2Q8TBJ5 459 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 SULT4A1Q9BR01 284 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 TMEM121Q9BTD3 319 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 SYT4Q9H2B2 425 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 NELFAQ9H3P2 528 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 MROH8Q9H579 483 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 ANKEF1Q9NU02 776 aa6.16□□□□□ -1.42
VCAN-203ENST00000343200 PTPRZ1P23471 2315 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms