RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 CASP12Q6UXS9 341 aa8.06□□□□□ -1.12
UBE4B-202ENST00000343090 SPATA31D4Q6ZUB0 917 aa8.06□□□□□ -1.12
UBE4B-202ENST00000343090 USP45Q70EL2 814 aa8.06□□□□□ -1.12
UBE4B-202ENST00000343090 SLCO6A1Q86UG4 719 aa8.06□□□□□ -1.12
UBE4B-202ENST00000343090 TDRPQ86YL5 185 aa8.06□□□□□ -1.12
UBE4B-202ENST00000343090 SVOPQ8N4V2 548 aa8.06□□□□□ -1.12
UBE4B-202ENST00000343090 GATA6Q92908 595 aa8.06□□□□□ -1.12
UBE4B-202ENST00000343090 TWNKQ96RR1 684 aa8.06□□□□□ -1.12
UBE4B-202ENST00000343090 TCF12Q99081 682 aa8.06□□□□□ -1.12
UBE4B-202ENST00000343090 MIPEPQ99797 713 aa8.06□□□□□ -1.12
UBE4B-202ENST00000343090 NTPCRQ9BSD7 190 aaKnown RBP8.06□□□□□ -1.12
UBE4B-202ENST00000343090 C2orf49Q9BVC5 232 aaPredicted RBP8.06□□□□□ -1.12
UBE4B-202ENST00000343090 GBA3Q9H227 469 aa8.06□□□□□ -1.12
UBE4B-202ENST00000343090 ZNF395Q9H8N7 513 aaPredicted RBP8.06□□□□□ -1.12
UBE4B-202ENST00000343090 RPRD1BQ9NQG5 326 aaKnown RBP8.06□□□□□ -1.12
UBE4B-202ENST00000343090 DERAQ9Y315 318 aa8.06□□□□□ -1.12
UBE4B-202ENST00000343090 MYOCOSA0A1B0GUC4 107 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 CENPXA8MT69 81 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 CXorf49A8MYA2 514 aaPredicted RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 WBP4O75554 376 aaKnown RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 CCNKO75909 580 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 H6PDO95479 791 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 PTPN3P26045 913 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 TKTP29401 623 aaKnown RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 ICAM3P32942 547 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 RAB14P61106 215 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 IRF9Q00978 393 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 ABRQ12979 859 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 BNIP3Q12983 259 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 DUSP4Q13115 394 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 MYLK3Q32MK0 819 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 LSM12Q3MHD2 195 aaKnown RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 DCLRE1AQ6PJP8 1040 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 ZNF605Q86T29 641 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 OOSP2Q86WS3 158 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 SFRP1Q8N474 314 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 OR4K2Q8NGD2 314 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 WDR48Q8TAF3 677 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 UBASH3BQ8TF42 649 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 UTP4Q969X6 686 aaKnown RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 PCED1BQ96HM7 432 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 UROC1Q96N76 676 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 HBEGFQ99075 208 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 DTLQ9NZJ0 730 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 GIT1Q9Y2X7 761 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 SMIM35A0A1B0GVV1 85 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 MYBPHLA2RUH7 354 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 FAM25AB3EWG3 89 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 FAM25CB3EWG5 89 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 FAM25GB3EWG6 89 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 E9PAM4 449 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 IPO13O94829 963 aaKnown RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 KRT20P35900 424 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 STT3AP46977 705 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 CDK9P50750 372 aaKnown RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 ANXA11P50995 505 aaKnown RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 LIMK2P53671 638 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 COPZ1P61923 177 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 CYP4F2P78329 520 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 OGDHQ02218 1023 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 CYP4F3Q08477 520 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 FCHO2Q0JRZ9 810 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 TAF10Q12962 218 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 PRKG2Q13237 762 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 ANGPT1Q15389 498 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 SETMARQ53H47 684 aaPredicted RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 ZC3H7AQ8IWR0 971 aaKnown RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 TBATAQ96M53 351 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 MRPL9Q9BYD2 267 aaKnown RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 SSU72Q9NP77 194 aaKnown RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 DNAJC28Q9NX36 388 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 ZNF214Q9UL59 606 aaPredicted RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 SF3B1O75533 1304 aaKnown RBP eCLIP8.05□□□□□ -1.122e-6■■■■■ 105.4
UBE4B-202ENST00000343090 HMGB3O15347 200 aaKnown RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 SLC22A3O75751 556 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 NADKO95544 446 aaPredicted RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 ENO2P09104 434 aaPredicted RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 HPCAL1P37235 193 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 HNF4AP41235 474 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 PRKAG1P54619 331 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 GNA12Q03113 381 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 C1DQ13901 141 aaKnown RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 PITRM1Q5JRX3 1037 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 TAC4Q86UU9 113 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 ST13P5Q8NFI4 369 aaPredicted RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 C19orf60Q96EN9 201 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 REXO5Q96IC2 774 aaKnown RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 TEKT5Q96M29 485 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 PPM1MQ96MI6 270 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 GATA5Q9BWX5 397 aaPredicted RBP8.05□□□□□ -1.12
UBE4B-202ENST00000343090 RHOBTB2Q9BYZ6 727 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 TMEM39AQ9NV64 488 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 FAIMQ9NVQ4 179 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 SLIT2O94813 1529 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 SNTNA6NMZ2 147 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 ANXA6P08133 673 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 PPP2R1BP30154 601 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 PTPN9P43378 593 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 CDH15P55291 814 aa8.05□□□□□ -1.12
UBE4B-202ENST00000343090 SMAD3P84022 425 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms