RNA–Protein interactions for RNA: ENST00000342785.8

VCAN-202, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 7,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-202ENST00000342785 USP45Q70EL2 814 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 CIR1Q86X95 450 aaPredicted RBP7.18□□□□□ -1.26
VCAN-202ENST00000342785 HJURPQ8NCD3 748 aaPredicted RBP7.18□□□□□ -1.26
VCAN-202ENST00000342785 OSBPL2Q9H1P3 480 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 ATP13A3Q9H7F0 1226 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 RAB26Q9ULW5 256 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 ZNF142P52746 1687 aaPredicted RBP7.18□□□□□ -1.26
VCAN-202ENST00000342785 OR51F1A6NGY5 319 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 DLGAP3O95886 979 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 C1RP00736 705 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 CXCR3P49682 368 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 PFKPQ01813 784 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 GHRHRQ02643 423 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 LIPEQ05469 1076 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 LRTOMTQ8WZ04 291 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 GPR22Q99680 433 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 H2AFY2Q9P0M6 372 aaPredicted RBP7.18□□□□□ -1.26
VCAN-202ENST00000342785 PADI4Q9UM07 663 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 SNX6Q9UNH7 406 aa7.18□□□□□ -1.26
VCAN-202ENST00000342785 TMEM233B4DJY2 109 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 ACSL4O60488 711 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 EPN2O95208 641 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 FAM163BP0C2L3 166 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 HPCAP84074 193 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 DPYSQ14117 519 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 RALGPS2Q86X27 583 aaPredicted RBP7.17□□□□□ -1.26
VCAN-202ENST00000342785 KBTBD2Q8IY47 623 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 SVOPQ8N4V2 548 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 OR52E6Q96RD3 313 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 GIMAP4Q9NUV9 329 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 MAP1BP46821 2468 aaKnown RBP7.17□□□□□ -1.26
VCAN-202ENST00000342785 NPEPPSL1A6NEC2 478 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 HNRNPCL2B2RXH8 293 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 GOT2P00505 430 aaKnown RBP7.17□□□□□ -1.26
VCAN-202ENST00000342785 CST1P01037 141 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 NDST2P52849 883 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 SNRPD1P62314 119 aaKnown RBP7.17□□□□□ -1.26
VCAN-202ENST00000342785 GALNT2Q10471 571 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 PCLAFQ15004 111 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 IL23RQ5VWK5 629 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 GRIN3AQ8TCU5 1115 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 BRSK1Q8TDC3 778 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 TUBGCP5Q96RT8 1024 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 HAPLN3Q96S86 360 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 MAGEL2Q9UJ55 1249 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 TMCO1Q9UM00 188 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 C9IYK1 514 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 PIP5K1BO14986 540 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 SIX3O95343 332 aaPredicted RBP7.17□□□□□ -1.26
VCAN-202ENST00000342785 F2P00734 622 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 HLA-DQB2P05538 268 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 GNPDA1P46926 289 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 GJA9P57773 515 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 IL10RBQ08334 325 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 SLC10A2Q12908 348 aaPredicted RBP7.17□□□□□ -1.26
VCAN-202ENST00000342785 DPY19L2P1Q6NXN4 242 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 LINGO4Q6UY18 593 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 ELMO1Q92556 727 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 MAGEH1Q9H213 219 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 ZDHHC6Q9H6R6 413 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 MOCS1Q9NZB8 636 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 SLC2A6Q9UGQ3 507 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 POLR3HQ9Y535 204 aaPredicted RBP7.17□□□□□ -1.26
VCAN-202ENST00000342785 COPG1Q9Y678 874 aaKnown RBP7.17□□□□□ -1.26
VCAN-202ENST00000342785 DYTNA2CJ06 578 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 A8MT66 165 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 ELNP15502 786 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 ALDH9A1P49189 494 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 MAPK11Q15759 364 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 VARS2Q5ST30 1063 aaKnown RBP7.17□□□□□ -1.26
VCAN-202ENST00000342785 CERS6Q6ZMG9 384 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 PLD6Q8N2A8 252 aaKnown RBP7.17□□□□□ -1.26
VCAN-202ENST00000342785 CLHC1Q8NHS4 586 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 ABCG8Q9H221 673 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 IPPKQ9H8X2 491 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 CRTAC1Q9NQ79 661 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 TRPC4Q9UBN4 977 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 DUSP12Q9UNI6 340 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 ZNF487B1APH4 448 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 MATN2O00339 956 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 PIRO00625 290 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 GABRDO14764 452 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 TRMUO75648 421 aaKnown RBP7.17□□□□□ -1.26
VCAN-202ENST00000342785 OR4F21O95013 312 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 ZBTB48P10074 688 aaPredicted RBP7.17□□□□□ -1.26
VCAN-202ENST00000342785 FGF3P11487 239 aaPredicted RBP7.17□□□□□ -1.26
VCAN-202ENST00000342785 ENDOVQ8N8Q3 282 aaKnown RBP7.17□□□□□ -1.26
VCAN-202ENST00000342785 PRR11Q96HE9 360 aaPredicted RBP7.17□□□□□ -1.26
VCAN-202ENST00000342785 KLHL25Q9H0H3 589 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 C1orf21Q9H246 121 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 OSGEPL1Q9H4B0 414 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 AHSPQ9NZD4 102 aa7.17□□□□□ -1.26
VCAN-202ENST00000342785 CCDC189A1A4V9 331 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 CKBP12277 381 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 POLR2JP52435 117 aaKnown RBP7.16□□□□□ -1.26
VCAN-202ENST00000342785 ADGRE1Q14246 886 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 CCL14Q16627 93 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 CCDC142Q17RM4 750 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 ZNF549Q6P9A3 640 aa7.16□□□□□ -1.26
VCAN-202ENST00000342785 CCDC103Q8IW40 242 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms