RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 TTPAP49638 278 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 DNAJB13P59910 316 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 KCNJ2P63252 427 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 SULT2A1Q06520 285 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 PDAP1Q13442 181 aaKnown RBP19.93■□□□□ 0.78
RTN1-202ENST00000342503 DMC1Q14565 340 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 CDKN3Q16667 212 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 CARD16Q5EG05 197 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 TMC5Q6UXY8 1006 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 KIF2BQ8N4N8 673 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 CELF5Q8N6W0 485 aaKnown RBP19.93■□□□□ 0.78
RTN1-202ENST00000342503 PCDH20Q8N6Y1 951 aaKnown RBP19.93■□□□□ 0.78
RTN1-202ENST00000342503 FAM136AQ96C01 138 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 CCDC68Q9H2F9 335 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 POMKQ9H5K3 350 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 STN1Q9H668 368 aaKnown RBP19.93■□□□□ 0.78
RTN1-202ENST00000342503 ZFYVE1Q9HBF4 777 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 ARL8BQ9NVJ2 186 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 C1orf232A0A0U1RR37 186 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 CAPN8A6NHC0 703 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 SLC9A3R1O14745 358 aaPredicted RBP19.93■□□□□ 0.78
RTN1-202ENST00000342503 CD1DP15813 335 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 MPSTP25325 297 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 NRIP1P48552 1158 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 IDH3AP50213 366 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 TUBB3Q13509 450 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 DUSP6Q16828 381 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 PTPRNQ16849 979 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 FBXW10Q5XX13 1052 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 TAS2R42Q7RTR8 314 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 KIAA0907Q7Z7F0 614 aaPredicted RBP19.93■□□□□ 0.78
RTN1-202ENST00000342503 TMEM237Q96Q45 408 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 TUBGCP5Q96RT8 1024 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 ILKAPQ9H0C8 392 aaPredicted RBP19.93■□□□□ 0.78
RTN1-202ENST00000342503 ALG9Q9H6U8 611 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 VPS9D1Q9Y2B5 631 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 MED16Q9Y2X0 877 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 RAP2CQ9Y3L5 183 aa19.93■□□□□ 0.78
RTN1-202ENST00000342503 CHD9Q3L8U1 2897 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 PFDN6O15212 129 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 OR1I1O60431 355 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 CLDN7O95471 211 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 ATP5BP06576 529 aaKnown RBP19.92■□□□□ 0.78
RTN1-202ENST00000342503 ZNF37AP17032 561 aaPredicted RBP19.92■□□□□ 0.78
RTN1-202ENST00000342503 KCNA5P22460 613 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 SP100P23497 879 aaPredicted RBP19.92■□□□□ 0.78
RTN1-202ENST00000342503 MAGEA10P43363 369 aaPredicted RBP19.92■□□□□ 0.78
RTN1-202ENST00000342503 CCNHP51946 323 aaPredicted RBP19.92■□□□□ 0.78
RTN1-202ENST00000342503 CACNG1Q06432 222 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 SETMARQ53H47 684 aaPredicted RBP19.92■□□□□ 0.78
RTN1-202ENST00000342503 ARL13AQ5H913 290 aaPredicted RBP19.92■□□□□ 0.78
RTN1-202ENST00000342503 AARS2Q5JTZ9 985 aaKnown RBP19.92■□□□□ 0.78
RTN1-202ENST00000342503 FAM91A1Q658Y4 838 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 TMEM215Q68D42 235 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 ISCA2Q86U28 154 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 LSMEM2Q8N112 164 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 CCNYL1Q8N7R7 359 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 DDX51Q8N8A6 666 aaKnown RBP eCLIP19.92■□□□□ 0.78
RTN1-202ENST00000342503 MYLIPQ8WY64 445 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 RSPRY1Q96DX4 576 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 BIRC8Q96P09 236 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 SUV39H2Q9H5I1 410 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 ZDHHC6Q9H6R6 413 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 ARHGEF3Q9NR81 526 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 ARMCX1Q9P291 453 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 SLC30A1Q9Y6M5 507 aa19.92■□□□□ 0.78
RTN1-202ENST00000342503 A8MT66 165 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 GPR39O43194 453 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 ZBTB14O43829 449 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 NPHS1O60500 1241 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 CCDC22O60826 627 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 PKMP14618 531 aaKnown RBP19.91■□□□□ 0.78
RTN1-202ENST00000342503 KCNC1P48547 511 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 KRT72Q14CN4 511 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 DHCR24Q15392 516 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 VWA5B1Q5TIE3 1220 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 DPY19L3Q6ZPD9 716 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 AHI1Q8N157 1196 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 VN1R2Q8NFZ6 395 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 AGR3Q8TD06 166 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 PTERQ96BW5 349 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 NSL1Q96IY1 281 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 TUBB6Q9BUF5 446 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 SLC2A11Q9BYW1 496 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 CPEB1Q9BZB8 566 aaKnown RBP19.91■□□□□ 0.78
RTN1-202ENST00000342503 CYP4F12Q9HCS2 524 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 DUS2Q9NX74 493 aaKnown RBP19.91■□□□□ 0.78
RTN1-202ENST00000342503 TAS2R13Q9NYV9 303 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 ERVW-1Q9UQF0 538 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 FAM50BQ9Y247 325 aa19.91■□□□□ 0.78
RTN1-202ENST00000342503 RASSF9O75901 435 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 POP4O95707 220 aaKnown RBP19.9■□□□□ 0.78
RTN1-202ENST00000342503 POLR2EP19388 210 aaKnown RBP19.9■□□□□ 0.78
RTN1-202ENST00000342503 VIPR2P41587 438 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 ALDH18A1P54886 795 aaKnown RBP19.9■□□□□ 0.78
RTN1-202ENST00000342503 CTSL3PQ5NE16 218 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 PAQR3Q6TCH7 311 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 FAM151BQ6UXP7 276 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 TRIM67Q6ZTA4 783 aa19.9■□□□□ 0.78
RTN1-202ENST00000342503 Q6ZVU0 165 aa19.9■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms