RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 PCDHB9Q9Y5E1 797 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 GNG14A0A1W2PPG7 69 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 SNAP91O60641 907 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 DBTP11182 482 aaKnown RBP12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 PRIM2P49643 509 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 SEPHS1P49903 392 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 CLCQ05315 142 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 IKBKEQ14164 716 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 NFE2Q16621 373 aaPredicted RBP12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 IQSEC1Q6DN90 963 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 LINGO4Q6UY18 593 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 TRIM74Q86UV6 250 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 TRIM73Q86UV7 250 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 OR8H2Q8N162 312 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 TOP6BLQ8N6T0 577 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 ZFAND2BQ8WV99 257 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 REXO4Q9GZR2 422 aaKnown RBP12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 EIF2B3Q9NR50 452 aaKnown RBP12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 CNTN3Q9P232 1028 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 UBA2Q9UBT2 640 aaPredicted RBP12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 CIDEBQ9UHD4 219 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 A0A1W2PQ67 120 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 J3KR12 359 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 ENPP3O14638 875 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 WEE1P30291 646 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 DUSP28Q4G0W2 176 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 ZNF554Q86TJ5 538 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 AHI1Q8N157 1196 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 NPWQ8N729 165 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 SLC45A3Q96JT2 553 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 GPR22Q99680 433 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 MLPHQ9BV36 600 aaPredicted RBP12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 UGT2B28Q9BY64 529 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 ZNF556Q9HAH1 456 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 DNAAF2Q9NVR5 837 aaKnown RBP12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 CACNA2D2Q9NY47 1150 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 ADGRE2Q9UHX3 823 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 SNX8Q9Y5X2 465 aa12.4□□□□□ -0.42
SNRNP48-201ENST00000342415 IQCF5A8MTL0 148 aa12.4□□□□□ -0.43
SNRNP48-201ENST00000342415 MFN2O95140 757 aa12.4□□□□□ -0.43
SNRNP48-201ENST00000342415 NADKO95544 446 aaPredicted RBP12.4□□□□□ -0.43
SNRNP48-201ENST00000342415 GOT2P00505 430 aaKnown RBP12.4□□□□□ -0.43
SNRNP48-201ENST00000342415 IDO1P14902 403 aa12.4□□□□□ -0.43
SNRNP48-201ENST00000342415 HLA-DPA1P20036 260 aa12.4□□□□□ -0.43
SNRNP48-201ENST00000342415 PBLDP30039 288 aaPredicted RBP12.4□□□□□ -0.43
SNRNP48-201ENST00000342415 AXLP30530 894 aa12.4□□□□□ -0.43
SNRNP48-201ENST00000342415 MTHFRP42898 656 aa12.4□□□□□ -0.43
SNRNP48-201ENST00000342415 DIO3P55073 304 aa12.4□□□□□ -0.43
SNRNP48-201ENST00000342415 RHDQ02161 417 aa12.4□□□□□ -0.43
SNRNP48-201ENST00000342415 MERTKQ12866 999 aa12.4□□□□□ -0.43
SNRNP48-201ENST00000342415 C11orf96Q7Z7L8 435 aa12.4□□□□□ -0.43
SNRNP48-201ENST00000342415 RAET1EQ8TD07 263 aa12.4□□□□□ -0.43
SNRNP48-201ENST00000342415 EIF2B4Q9UI10 523 aaKnown RBP12.4□□□□□ -0.43
SNRNP48-201ENST00000342415 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP12.4□□□□□ -0.43
SNRNP48-201ENST00000342415 ZNF197O14709 1029 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 MATN3O15232 486 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 BCAS2O75934 225 aaPredicted RBP12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 SLC7A1P30825 629 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 S100A3P33764 101 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 DGKQP52824 942 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 SOX4Q06945 474 aaPredicted RBP12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 TSTD2Q5T7W7 516 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 UGT3A1Q6NUS8 523 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 DET1Q7L5Y6 550 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 C12orf42Q96LP6 360 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 ADGRE3Q9BY15 652 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 AMBNQ9NP70 447 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 TIMMDC1Q9NPL8 285 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 GALPQ9UBC7 116 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 OPTCQ9UBM4 332 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 PPP2R3BQ9Y5P8 575 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 WDR47O94967 919 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 STAU1O95793 577 aaKnown RBP12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 SLC35E2BP0CK96 405 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 CDH3P22223 829 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 VEPH1Q14D04 833 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 PAQR3Q6TCH7 311 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 CRTC3Q6UUV7 619 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 CROCCP3Q8IVE0 287 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 CRYBG2Q8N1P7 616 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 ZNF540Q8NDQ6 660 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 OR2T12Q8NG77 320 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 OR7D4Q8NG98 312 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 OR10A6Q8NH74 314 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 MZB1Q8WU39 189 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 ARNTL2Q8WYA1 636 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 HTRA1Q92743 480 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 CENPNQ96H22 339 aaPredicted RBP12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 NPY6RQ99463 290 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 HOPXQ9BPY8 73 aaPredicted RBP12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 VPS9D1Q9Y2B5 631 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 PCDHB5Q9Y5E4 795 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 MEIS3P2A8K0S8 358 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 POLR2JP52435 117 aaKnown RBP12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 PRKCQQ04759 706 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 LAPTM5Q13571 262 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 TIGD5Q53EQ6 642 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 TTC23Q5W5X9 447 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 FBXL19Q6PCT2 694 aa12.39□□□□□ -0.43
SNRNP48-201ENST00000342415 CHSY3Q70JA7 882 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 328.1 ms