RNA–Protein interactions for RNA: ENST00000342294.4

TRA2B-202, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best) BASIC

Gene TRA2B, Length 288 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-202ENST00000342294 NCSTNQ92542 709 aa16.8■□□□□ 0.28
TRA2B-202ENST00000342294 CELF6Q96J87 481 aaKnown RBP16.8■□□□□ 0.28
TRA2B-202ENST00000342294 C11orf70Q9BRQ4 267 aa16.8■□□□□ 0.28
TRA2B-202ENST00000342294 SLC39A8Q9C0K1 460 aa16.8■□□□□ 0.28
TRA2B-202ENST00000342294 CROTQ9UKG9 612 aa16.8■□□□□ 0.28
TRA2B-202ENST00000342294 MAP4K5Q9Y4K4 846 aa16.8■□□□□ 0.28
TRA2B-202ENST00000342294 ABCA12Q86UK0 2595 aa16.8■□□□□ 0.28
TRA2B-202ENST00000342294 F8VZ95 297 aa16.79■□□□□ 0.28
TRA2B-202ENST00000342294 HTRA2O43464 458 aaPredicted RBP16.79■□□□□ 0.28
TRA2B-202ENST00000342294 MAP3K6O95382 1288 aa16.79■□□□□ 0.28
TRA2B-202ENST00000342294 DDAH2O95865 285 aa16.79■□□□□ 0.28
TRA2B-202ENST00000342294 SOD1P00441 154 aa16.79■□□□□ 0.28
TRA2B-202ENST00000342294 ZNF28P17035 718 aa16.79■□□□□ 0.28
TRA2B-202ENST00000342294 GPD1P21695 349 aa16.79■□□□□ 0.28
TRA2B-202ENST00000342294 VIPR1P32241 457 aa16.79■□□□□ 0.28
TRA2B-202ENST00000342294 GSCP56915 257 aaPredicted RBP16.79■□□□□ 0.28
TRA2B-202ENST00000342294 AP1S1P61966 158 aa16.79■□□□□ 0.28
TRA2B-202ENST00000342294 FMO1Q01740 532 aa16.79■□□□□ 0.28
TRA2B-202ENST00000342294 DPTQ07507 201 aa16.79■□□□□ 0.28
TRA2B-202ENST00000342294 MIIPQ5JXC2 388 aa16.79■□□□□ 0.28
TRA2B-202ENST00000342294 Q6ZVL8 140 aa16.79■□□□□ 0.28
TRA2B-202ENST00000342294 TMEM135Q86UB9 458 aa16.79■□□□□ 0.28
TRA2B-202ENST00000342294 ZNF677Q86XU0 584 aa16.79■□□□□ 0.28
TRA2B-202ENST00000342294 APLFQ8IW19 511 aaPredicted RBP16.79■□□□□ 0.28
TRA2B-202ENST00000342294 ZMYND15Q9H091 742 aa16.79■□□□□ 0.28
TRA2B-202ENST00000342294 NDST4Q9H3R1 872 aa16.79■□□□□ 0.28
TRA2B-202ENST00000342294 SARS2Q9NP81 518 aaKnown RBP16.79■□□□□ 0.28
TRA2B-202ENST00000342294 ARHGAP42A6NI28 874 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 RECKO95980 971 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 UCHL3P15374 230 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 LHCGRP22888 699 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 COL8A1P27658 744 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 HTR7P34969 479 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 DCTP40126 519 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 SCNN1BP51168 640 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 AIF1P55008 147 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 CDR2Q01850 454 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 HHEXQ03014 270 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 RFTN1Q14699 578 aaPredicted RBP16.78■□□□□ 0.28
TRA2B-202ENST00000342294 RAET1GQ6H3X3 334 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 SCYL2Q6P3W7 929 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 DOK6Q6PKX4 331 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 C6orf15Q6UXA7 325 aaPredicted RBP16.78■□□□□ 0.28
TRA2B-202ENST00000342294 TICAM1Q8IUC6 712 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 FAM114A1Q8IWE2 563 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 PAF1Q8N7H5 531 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 PSKH2Q96QS6 385 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 CINPQ9BW66 212 aaPredicted RBP16.78■□□□□ 0.28
TRA2B-202ENST00000342294 STK33Q9BYT3 514 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 ULBP3Q9BZM4 244 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 DONSONQ9NYP3 566 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 TMEM98Q9Y2Y6 226 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 DOPEY1Q5JWR5 2465 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 ESPL1Q14674 2120 aa16.78■□□□□ 0.28
TRA2B-202ENST00000342294 LRBAP50851 2863 aa16.77■□□□□ 0.28
TRA2B-202ENST00000342294 PSMD11O00231 422 aa16.77■□□□□ 0.28
TRA2B-202ENST00000342294 CCP110O43303 1012 aa16.77■□□□□ 0.28
TRA2B-202ENST00000342294 ANKRD34CP0C6C1 535 aa16.77■□□□□ 0.28
TRA2B-202ENST00000342294 EPHA4P54764 986 aa16.77■□□□□ 0.28
TRA2B-202ENST00000342294 LRP8Q14114 963 aa16.77■□□□□ 0.28
TRA2B-202ENST00000342294 VWA3BQ502W6 1294 aa16.77■□□□□ 0.28
TRA2B-202ENST00000342294 DENND2CQ68D51 928 aa16.77■□□□□ 0.28
TRA2B-202ENST00000342294 MAMDC2Q7Z304 686 aaPredicted RBP16.77■□□□□ 0.28
TRA2B-202ENST00000342294 TECPR1Q7Z6L1 1165 aa16.77■□□□□ 0.28
TRA2B-202ENST00000342294 ARHGAP12Q8IWW6 846 aa16.77■□□□□ 0.28
TRA2B-202ENST00000342294 PCDHGA6Q9Y5G7 932 aa16.77■□□□□ 0.28
TRA2B-202ENST00000342294 OAS3Q9Y6K5 1087 aaKnown RBP16.77■□□□□ 0.28
TRA2B-202ENST00000342294 CELSR2Q9HCU4 2923 aa16.77■□□□□ 0.27
TRA2B-202ENST00000342294 MN1Q10571 1320 aaPredicted RBP16.76■□□□□ 0.27
TRA2B-202ENST00000342294 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP16.76■□□□□ 0.27
TRA2B-202ENST00000342294 A0A1W2PQ67 120 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 TCRBV5S1A1TA0A578 114 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 TTC24A2A3L6 582 aaPredicted RBP16.76■□□□□ 0.27
TRA2B-202ENST00000342294 CDC14CA4D256 554 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 WIPF3A6NGB9 483 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 SIGLEC16A6NMB1 481 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 DNAJB5O75953 348 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 SORBS2O94875 1100 aaKnown RBP16.76■□□□□ 0.27
TRA2B-202ENST00000342294 CLDN1O95832 211 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 UNGP13051 313 aaPredicted RBP16.76■□□□□ 0.27
TRA2B-202ENST00000342294 NOP2P46087 812 aaKnown RBP16.76■□□□□ 0.27
TRA2B-202ENST00000342294 PPM1FP49593 454 aaPredicted RBP16.76■□□□□ 0.27
TRA2B-202ENST00000342294 ZNF143P52747 638 aaPredicted RBP16.76■□□□□ 0.27
TRA2B-202ENST00000342294 TPI1P60174 286 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 SEMA5AQ13591 1074 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 IYDQ6PHW0 289 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 ADAMTSL4Q6UY14 1074 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 ARHGAP36Q6ZRI8 547 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 LYSMD3Q7Z3D4 306 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 GALNT6Q8NCL4 622 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 SH3KBP1Q96B97 665 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 TRIM55Q9BYV6 548 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 MLXIPLQ9NP71 852 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 KLHL3Q9UH77 587 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 KCND3Q9UK17 655 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 PCDHGC4Q9Y5F7 938 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 SHANK1Q9Y566 2161 aa16.76■□□□□ 0.27
TRA2B-202ENST00000342294 MED13Q9UHV7 2174 aa16.75■□□□□ 0.27
TRA2B-202ENST00000342294 A6NCN8 305 aa16.75■□□□□ 0.27
TRA2B-202ENST00000342294 GOLGA6CA6NDK9 693 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms