RNA–Protein interactions for RNA: ENST00000342203.7

SSX2IP-201, Transcript of SSX family member 2 interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX2IP, Length 5,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-201ENST00000342203 CINPQ9BW66 212 aaPredicted RBP12.51□□□□□ -0.41
SSX2IP-201ENST00000342203 HDHD2Q9H0R4 259 aa12.51□□□□□ -0.41
SSX2IP-201ENST00000342203 OGDHLQ9ULD0 1010 aa12.51□□□□□ -0.41
SSX2IP-201ENST00000342203 BBIP1A8MTZ0 92 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 SOCS2O14508 198 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 SERPINF2P08697 491 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 PRKACGP22612 351 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 POLR2JP52435 117 aaKnown RBP12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 LEMD2Q8NC56 503 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 TRPV3Q8NET8 790 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 OR10A6Q8NH74 314 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 CLPBQ9H078 707 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 CD320Q9NPF0 282 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 CPA4Q9UI42 421 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 NOTOA8MTQ0 251 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 FAM189A1O60320 539 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 GSTT2P0CG29 244 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 GSTT2BP0CG30 244 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 COL6A2P12110 1019 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 PMS2P3Q13401 168 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 NEK10Q6ZWH5 1172 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 RSPH1Q8WYR4 309 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 TRMOQ9BU70 441 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 ZDHHC7Q9NXF8 308 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 MAGEL2Q9UJ55 1249 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 TMED5Q9Y3A6 229 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 MED1Q15648 1581 aaPredicted RBP12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 HTR3EA5X5Y0 456 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 FAM25AB3EWG3 89 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 FAM25CB3EWG5 89 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 FAM25GB3EWG6 89 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 F8W810 466 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 NRP1O14786 923 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 RGS10O43665 173 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 VPS4BO75351 444 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 AHSGP02765 367 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 GSK3BP49841 420 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 SPDYE7PQ495Y7 208 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 GPRIN3Q6ZVF9 776 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 ST13P5Q8NFI4 369 aaPredicted RBP12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 EXOC2Q96KP1 924 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 AKTIPQ9H8T0 292 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 KRT84Q9NSB2 600 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 KDM3BQ7LBC6 1761 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 SPATA31C2B4DYI2 1134 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 AIREO43918 545 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 GNAO1P09471 354 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 DNAJB2P25686 324 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 BMXP51813 675 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 SOWAHAQ2M3V2 549 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 INO80DQ53TQ3 878 aaPredicted RBP12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 A8MU76 341 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 PALM2-AKAP2B1ALY0 433 aaPredicted RBP12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 IRF1P10914 325 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 IGFBP5P24593 272 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 TKTP29401 623 aaKnown RBP12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 TRAP1Q12931 704 aaKnown RBP12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 ZNF484Q5JVG2 852 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 R3HCC1LQ7Z5L2 792 aaKnown RBP12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 KBTBD8Q8NFY9 601 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 SEPT5Q99719 369 aaPredicted RBP12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 CEPT1Q9Y6K0 416 aa12.5□□□□□ -0.41
SSX2IP-201ENST00000342203 PRORSD1PA6NEY8 169 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 VBP1P61758 197 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 ILF2Q12905 390 aaKnown RBP12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 LAPTM4AQ15012 233 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 AP5B1Q2VPB7 878 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 ZCCHC8Q6NZY4 707 aaKnown RBP12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 TIFABQ6ZNK6 161 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 STRADAQ7RTN6 431 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 SNX29P2Q8IUI4 249 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 BBS7Q8IWZ6 715 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 TTC30BQ8N4P2 665 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 TBATAQ96M53 351 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 SMURF2Q9HAU4 748 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 TUBGCP4Q9UGJ1 667 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 AQP12BA6NM10 295 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 XYLBO75191 536 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 SEMA3DO95025 777 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 ARL2P36404 184 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 SLC1A2P43004 574 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 GMPSP49915 693 aaPredicted RBP12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 CDK18Q07002 472 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 CXCL9Q07325 125 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 SLC13A2Q13183 592 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 TMEM132BQ14DG7 1078 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 CPSF6Q16630 551 aaKnown RBP eCLIP12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 DALRD3Q5D0E6 543 aaKnown RBP12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 AQP12AQ8IXF9 295 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 TMEM130Q8N3G9 435 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 TMBIM1Q969X1 311 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 GLOD4Q9HC38 313 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 ABCB9Q9NP78 766 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 CATSPERZQ9NTU4 200 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 TLL2Q9Y6L7 1015 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 GNG14A0A1W2PPG7 69 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 CCDC182A6NF36 153 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 A8MX80 341 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 IFI30P13284 250 aa12.49□□□□□ -0.41
SSX2IP-201ENST00000342203 IL2P60568 153 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms