RNA–Protein interactions for RNA: ENST00000341753.10

TRIM28-202, Transcript of tripartite motif containing 28, humanhuman

TSL 1 (best) BASIC

Gene TRIM28, Length 2,709 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-202ENST00000341753 MLLT10P55197 1068 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 ITGADQ13349 1161 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 INTS6LQ5JSJ4 861 aaKnown RBP22.35■■□□□ 1.17
TRIM28-202ENST00000341753 LCN8Q6JVE9 175 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 DCLRE1AQ6PJP8 1040 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 SPRED1Q7Z699 444 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 TRPV3Q8NET8 790 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 KCTD13Q8WZ19 329 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 LRRC58Q96CX6 371 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 FEM1CQ96JP0 617 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 TMEM74Q96NL1 305 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 CRTAC1Q9NQ79 661 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 ACTR3BQ9P1U1 418 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 AP3B1O00203 1094 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 NOL3O60936 208 aaKnown RBP22.35■■□□□ 1.17
TRIM28-202ENST00000341753 PAMP19021 973 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 POLD2P49005 469 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 TMTC4Q5T4D3 741 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 MIER2Q8N344 545 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 GTF3C2Q8WUA4 911 aaPredicted RBP22.35■■□□□ 1.17
TRIM28-202ENST00000341753 CRYL1Q9Y2S2 319 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 IPPQ9Y573 584 aa22.35■■□□□ 1.17
TRIM28-202ENST00000341753 KPNA6O60684 536 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 CD4P01730 458 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 RBP1P09455 135 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 RPS6KA2Q15349 733 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 EGFLAMQ63HQ2 1017 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 FAM117BQ6P1L5 589 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 PTERQ96BW5 349 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 TUBGCP3Q96CW5 907 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 HOPXQ9BPY8 73 aaPredicted RBP22.34■■□□□ 1.17
TRIM28-202ENST00000341753 ANKRD12Q6UB98 2062 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 ANXA9O76027 345 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 ECT2LQ008S8 904 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 CYP2A13Q16696 494 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 TAC4Q86UU9 113 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 ZMIZ2Q8NF64 920 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 TWIST2Q8WVJ9 160 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 MRGPRX2Q96LB1 330 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 FCRL5Q96RD9 977 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 MRGBPQ9NV56 204 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 RBM22Q9NW64 420 aaKnown RBP eCLIP22.34■■□□□ 1.175e-7■■■■■ 40.4
TRIM28-202ENST00000341753 PKD2L2Q9NZM6 624 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 TSC2P49815 1807 aa22.34■■□□□ 1.17
TRIM28-202ENST00000341753 A0A1B0GTL3 188 aa22.33■■□□□ 1.17
TRIM28-202ENST00000341753 MYBPHLA2RUH7 354 aa22.33■■□□□ 1.17
TRIM28-202ENST00000341753 PSMD3O43242 534 aa22.33■■□□□ 1.17
TRIM28-202ENST00000341753 ZNF12P17014 697 aa22.33■■□□□ 1.17
TRIM28-202ENST00000341753 CCNA2P20248 432 aa22.33■■□□□ 1.17
TRIM28-202ENST00000341753 CXCR3P49682 368 aa22.33■■□□□ 1.17
TRIM28-202ENST00000341753 GSK3BP49841 420 aa22.33■■□□□ 1.17
TRIM28-202ENST00000341753 DIO3P55073 304 aa22.33■■□□□ 1.17
TRIM28-202ENST00000341753 GSTM4Q03013 218 aa22.33■■□□□ 1.17
TRIM28-202ENST00000341753 SV2CQ496J9 727 aa22.33■■□□□ 1.17
TRIM28-202ENST00000341753 PDCD4Q53EL6 469 aaKnown RBP22.33■■□□□ 1.17
TRIM28-202ENST00000341753 KIAA0930Q6ICG6 404 aaPredicted RBP22.33■■□□□ 1.17
TRIM28-202ENST00000341753 OR6P1Q8NGX9 317 aa22.33■■□□□ 1.17
TRIM28-202ENST00000341753 MUS81Q96NY9 551 aa22.33■■□□□ 1.17
TRIM28-202ENST00000341753 PPP1R10Q96QC0 940 aaKnown RBP22.33■■□□□ 1.17
TRIM28-202ENST00000341753 NEURL2Q9BR09 285 aa22.33■■□□□ 1.17
TRIM28-202ENST00000341753 SLAMF8Q9P0V8 285 aa22.33■■□□□ 1.17
TRIM28-202ENST00000341753 ZFC3H1O60293 1989 aaKnown RBP22.33■■□□□ 1.16
TRIM28-202ENST00000341753 SMIM35A0A1B0GVV1 85 aa22.33■■□□□ 1.16
TRIM28-202ENST00000341753 TTC24A2A3L6 582 aaPredicted RBP22.33■■□□□ 1.16
TRIM28-202ENST00000341753 BAIAP3O94812 1187 aa22.33■■□□□ 1.16
TRIM28-202ENST00000341753 HSD17B1P14061 328 aa22.33■■□□□ 1.16
TRIM28-202ENST00000341753 HGFP14210 728 aa22.33■■□□□ 1.16
TRIM28-202ENST00000341753 RFC2P35250 354 aa22.33■■□□□ 1.16
TRIM28-202ENST00000341753 ADRA1AP35348 466 aa22.33■■□□□ 1.16
TRIM28-202ENST00000341753 ACAP2Q15057 778 aa22.33■■□□□ 1.16
TRIM28-202ENST00000341753 MOGQ16653 247 aa22.33■■□□□ 1.16
TRIM28-202ENST00000341753 TWF2Q6IBS0 349 aaKnown RBP22.33■■□□□ 1.16
TRIM28-202ENST00000341753 TMEM214Q6NUQ4 689 aaKnown RBP22.33■■□□□ 1.16
TRIM28-202ENST00000341753 ISCA2Q86U28 154 aa22.33■■□□□ 1.16
TRIM28-202ENST00000341753 ARHGAP12Q8IWW6 846 aa22.33■■□□□ 1.16
TRIM28-202ENST00000341753 PTGR2Q8N8N7 351 aaPredicted RBP22.33■■□□□ 1.16
TRIM28-202ENST00000341753 UBXN10Q96LJ8 280 aa22.33■■□□□ 1.16
TRIM28-202ENST00000341753 TEX37Q96LM6 180 aa22.33■■□□□ 1.16
TRIM28-202ENST00000341753 MAGED1Q9Y5V3 778 aaPredicted RBP22.33■■□□□ 1.16
TRIM28-202ENST00000341753 MBLAC1A4D2B0 266 aaPredicted RBP22.32■■□□□ 1.16
TRIM28-202ENST00000341753 CACNG3O60359 315 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 CDK14O94921 469 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 AIF1P55008 147 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 BFSP2Q13515 415 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 NFYCQ13952 458 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 SLC22A9Q8IVM8 553 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 CLYBLQ8N0X4 340 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 MINDY1Q8N5J2 469 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 RSPH1Q8WYR4 309 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 SLC39A8Q9C0K1 460 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 TUBB1Q9H4B7 451 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 LTB4R2Q9NPC1 389 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 BBIP1A8MTZ0 92 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 DNAJB2P25686 324 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 PSEN2P49810 448 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 PHEXP78562 749 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 BNIP2Q12982 314 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 IRAK1BP1Q5VVH5 260 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 SLC30A3Q99726 388 aa22.32■■□□□ 1.16
TRIM28-202ENST00000341753 ALG2Q9H553 416 aa22.32■■□□□ 1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms