RNA–Protein interactions for RNA: ENST00000340882.2

NECTIN1-202, Transcript of nectin cell adhesion molecule 1, humanhuman

TSL 1 (best) BASIC

Gene NECTIN1, Length 1,059 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN1-202ENST00000340882 MAP7Q14244 749 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 RFLNAQ6ZTI6 216 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 MAMDC2Q7Z304 686 aaPredicted RBP16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 HSD11B1LQ7Z5J1 315 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 SLFN11Q7Z7L1 901 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 TICAM1Q8IUC6 712 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 CBARPQ8N350 705 aaPredicted RBP16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 SFRP1Q8N474 314 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 OR10G6Q8NH81 332 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 SLC20A1Q8WUM9 679 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 SCARF2Q96GP6 870 aaPredicted RBP16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 PCDHB3Q9Y5E6 796 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 OAS3Q9Y6K5 1087 aaKnown RBP16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 C2CD3Q4AC94 2353 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 OTOGQ6ZRI0 2925 aa16.29■□□□□ 0.2
NECTIN1-202ENST00000340882 KATNA1O75449 491 aa16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 SOD1P00441 154 aa16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 LHCGRP22888 699 aa16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 ERCC5P28715 1186 aaPredicted RBP16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 TNFRSF8P28908 595 aa16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 RFC1P35251 1148 aaPredicted RBP16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 PAPOLAP51003 745 aaKnown RBP16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 SMYD5Q6GMV2 418 aa16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 ARHGAP36Q6ZRI8 547 aa16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 TRIM74Q86UV6 250 aa16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 GALNT6Q8NCL4 622 aa16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 SLC30A5Q8TAD4 765 aa16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 DTD2Q96FN9 168 aa16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 TCTN2Q96GX1 697 aa16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 OR2M4Q96R27 311 aa16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 SLC39A8Q9C0K1 460 aa16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 RCOR3Q9P2K3 495 aaPredicted RBP16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 HOOK1Q9UJC3 728 aaKnown RBP16.28■□□□□ 0.2
NECTIN1-202ENST00000340882 GOLGA6CA6NDK9 693 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 GOLGA6BA6NDN3 693 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 TCP11X1B4DZS4 312 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 SORBS2O94875 1100 aaKnown RBP16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 HEXIM1O94992 359 aaKnown RBP16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 GOLGA6DP0CG33 693 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 MMP8P22894 467 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 MAN1A1P33908 653 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 MAPK9P45984 424 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 NFATC2Q13469 925 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 PYCR3Q53H96 274 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 RAET1GQ6H3X3 334 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 C6orf15Q6UXA7 325 aaPredicted RBP16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 Q6ZVL8 140 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 MARK2Q7KZI7 788 aaKnown RBP16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 SRRM1Q8IYB3 904 aaKnown RBP16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 PAF1Q8N7H5 531 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 EPS8L1Q8TE68 723 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 C11orf70Q9BRQ4 267 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 ULBP3Q9BZM4 244 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 GOLGA6AQ9NYA3 693 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 FZD10Q9ULW2 581 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 ATP6V1DQ9Y5K8 247 aa16.27■□□□□ 0.2
NECTIN1-202ENST00000340882 POLQO75417 2590 aa16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 WIPF3A6NGB9 483 aa16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 PALMO75781 387 aa16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 FGFR1OPO95684 399 aaKnown RBP16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 DDAH2O95865 285 aa16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 CYP1A1P04798 512 aaPredicted RBP16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 CHRNB2P17787 502 aa16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 SCNN1BP51168 640 aa16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 POLR2LP62875 67 aaKnown RBP16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 SH3BP2P78314 561 aa16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 PTP4A2Q12974 167 aa16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 CPZQ66K79 652 aa16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 SCYL2Q6P3W7 929 aa16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 WDR59Q6PJI9 974 aa16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 TSPAN33Q86UF1 283 aa16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 APLFQ8IW19 511 aaPredicted RBP16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 ELOA2Q8IYF1 753 aaPredicted RBP16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 MSANTD4Q8NCY6 345 aa16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 RUFY1Q96T51 708 aa16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 TBC1D10AQ9BXI6 508 aa16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 NAA15Q9BXJ9 866 aaKnown RBP16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 TWSG1Q9GZX9 223 aa16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 LUZP4Q9P127 313 aa16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 ERRFI1Q9UJM3 462 aaPredicted RBP16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 NOCTQ9UK39 431 aaKnown RBP16.26■□□□□ 0.19
NECTIN1-202ENST00000340882 GOLGA6L4A6NEF3 574 aa16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 CCP110O43303 1012 aa16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 CREG1O75629 220 aa16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 VIPR1P32241 457 aa16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 GFERP55789 205 aa16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 HHEXQ03014 270 aa16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 FOXM1Q08050 763 aa16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 CHAF1BQ13112 559 aa16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 SEMA5AQ13591 1074 aa16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 INPP5JQ15735 1006 aaPredicted RBP16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 C1QL3Q5VWW1 255 aa16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 PRR7Q8TB68 274 aa16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 SMIM14Q96QK8 99 aa16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 CINPQ9BW66 212 aaPredicted RBP16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 CATSPERBQ9H7T0 1116 aa16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 TBC1D29Q9UFV1 150 aa16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 CD84Q9UIB8 345 aa16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 PRKAB1Q9Y478 270 aa16.25■□□□□ 0.19
NECTIN1-202ENST00000340882 PCDHGC4Q9Y5F7 938 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms