RNA–Protein interactions for RNA: ENST00000340417.7

LIN54-201, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN54, Length 6,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-201ENST00000340417 POLR3BQ9NW08 1133 aaPredicted RBP12.79□□□□□ -0.36
LIN54-201ENST00000340417 CIDEBQ9UHD4 219 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 FKBPLQ9UIM3 349 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 MT-CYBP00156 380 aaPredicted RBP12.79□□□□□ -0.36
LIN54-201ENST00000340417 CHRNB2P17787 502 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 PFKLP17858 780 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 ATP6V0D1P61421 351 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 SLC44A4Q53GD3 710 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 MSANTD2Q6P1R3 559 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 SUN3Q8TAQ9 357 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 ASB2Q96Q27 587 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 PTPRHQ9HD43 1115 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 PCDHB3Q9Y5E6 796 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 TFEBP19484 476 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 GRK2P25098 689 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 AVPR1BP47901 424 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 ATP13A5Q4VNC0 1218 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 LHX8Q68G74 356 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 C16orf89Q6UX73 402 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 LRRTM4Q86VH4 590 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 PRSS58Q8IYP2 241 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 PTGR2Q8N8N7 351 aaPredicted RBP12.79□□□□□ -0.36
LIN54-201ENST00000340417 GPR156Q8NFN8 814 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 INPP5DQ92835 1189 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 PRICKLE1Q96MT3 831 aaPredicted RBP12.79□□□□□ -0.36
LIN54-201ENST00000340417 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.79□□□□□ -0.36
LIN54-201ENST00000340417 PHACTR1Q9C0D0 580 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 ZNF780BQ9Y6R6 833 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 RNGTTO60942 597 aaKnown RBP12.79□□□□□ -0.36
LIN54-201ENST00000340417 IFNA14P01570 189 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 PBX2P40425 430 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 PXNP49023 591 aaPredicted RBP12.79□□□□□ -0.36
LIN54-201ENST00000340417 VN1R2Q8NFZ6 395 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 HDAC7Q8WUI4 952 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 TBATAQ96M53 351 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 ZSCAN5AQ9BUG6 496 aa12.79□□□□□ -0.36
LIN54-201ENST00000340417 TPP1O14773 563 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 PRKAA2P54646 552 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 CA9Q16790 459 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 TMPRSS11BQ86T26 416 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 ZNF567Q8N184 647 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 NCSTNQ92542 709 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 CEP295NLQ96MC4 621 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 TTYH3Q9C0H2 523 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 FBRSQ9HAH7 460 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 HEBP1Q9NRV9 189 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 FAM107AO95990 144 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 SSR2P43308 183 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 RASIP1Q5U651 963 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 ICE2Q659A1 982 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 PBX4Q9BYU1 374 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 EFR3BQ9Y2G0 817 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 FFAR3O14843 346 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 GPR42O15529 346 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 KLK3P07288 261 aaPredicted RBP12.78□□□□□ -0.36
LIN54-201ENST00000340417 SRPRAP08240 638 aaKnown RBP12.78□□□□□ -0.36
LIN54-201ENST00000340417 ARSAP15289 507 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 RBMS1P29558 406 aaKnown RBP12.78□□□□□ -0.36
LIN54-201ENST00000340417 MAPK10P53779 464 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 RAB10P61026 200 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 OR52K2Q8NGK3 314 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 CMTM5Q96DZ9 223 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 ZIM3Q96PE6 472 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 EBNA1BP2Q99848 306 aaKnown RBP12.78□□□□□ -0.36
LIN54-201ENST00000340417 FAM83CQ9BQN1 747 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 NINJ2Q9NZG7 142 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 MTO1Q9Y2Z2 717 aaKnown RBP12.78□□□□□ -0.36
LIN54-201ENST00000340417 KIAA0100Q14667 2235 aaKnown RBP12.78□□□□□ -0.36
LIN54-201ENST00000340417 GRIN2DO15399 1336 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 BCLAF3A2AJT9 711 aaKnown RBP12.78□□□□□ -0.36
LIN54-201ENST00000340417 CLDN4O14493 209 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 AKAP10O43572 662 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 ERAL1O75616 437 aaKnown RBP12.78□□□□□ -0.36
LIN54-201ENST00000340417 STC2O76061 302 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 JUPP14923 745 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 ITPKAP23677 461 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 EMC10Q5UCC4 262 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 PRRG4Q9BZD6 226 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 SPATS2LQ9NUQ6 558 aaKnown RBP12.78□□□□□ -0.36
LIN54-201ENST00000340417 NUMBLQ9Y6R0 609 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 NR5A2O00482 541 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 TRIM13O60858 407 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 LILRB3O75022 631 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 SLC35G6P0C7Q6 338 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 INPP1P49441 399 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 SNX30Q5VWJ9 437 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 LYSMD4Q5XG99 296 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 RGS9BPQ6ZS82 235 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 CYP4Z1Q86W10 505 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 PTCD2Q8WV60 388 aaKnown RBP12.78□□□□□ -0.36
LIN54-201ENST00000340417 CCDC177Q9NQR7 707 aaPredicted RBP12.78□□□□□ -0.36
LIN54-201ENST00000340417 CXXC1Q9P0U4 656 aaPredicted RBP12.78□□□□□ -0.36
LIN54-201ENST00000340417 VWA7Q9Y334 891 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 STON1Q9Y6Q2 735 aa12.78□□□□□ -0.36
LIN54-201ENST00000340417 SEMA4FO95754 770 aa12.77□□□□□ -0.36
LIN54-201ENST00000340417 VARSP26640 1264 aaKnown RBP12.77□□□□□ -0.36
LIN54-201ENST00000340417 GRIA4P48058 902 aa12.77□□□□□ -0.36
LIN54-201ENST00000340417 MED21Q13503 144 aa12.77□□□□□ -0.36
LIN54-201ENST00000340417 TJAP1Q5JTD0 557 aa12.77□□□□□ -0.36
LIN54-201ENST00000340417 RAB7BQ96AH8 199 aa12.77□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms