RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 ARHGAP6O43182 974 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 RASGRP1O95267 797 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 ALPPL2P10696 532 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 MYCLP1P12525 358 aaPredicted RBP15.22■□□□□ 0.03
PRKN-201ENST00000338468 TEAD1P28347 426 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 RBL1P28749 1068 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 BLKP51451 505 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 CDK3Q00526 305 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 CDK18Q07002 472 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 TCEA2Q15560 299 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 PCSK7Q16549 785 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 ZCCHC8Q6NZY4 707 aaKnown RBP15.22■□□□□ 0.03
PRKN-201ENST00000338468 ZNF765Q7L2R6 523 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 RD3Q7Z3Z2 195 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 NLRP8Q86W28 1048 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 SYCE1Q8N0S2 351 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 TXLNBQ8N3L3 684 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 RNF10Q8N5U6 811 aaKnown RBP15.22■□□□□ 0.03
PRKN-201ENST00000338468 PTCD2Q8WV60 388 aaKnown RBP15.22■□□□□ 0.03
PRKN-201ENST00000338468 HTR3CQ8WXA8 447 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 OXNAD1Q96HP4 312 aaPredicted RBP15.22■□□□□ 0.03
PRKN-201ENST00000338468 HES6Q96HZ4 224 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 FAM118BQ9BPY3 351 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 GORASP1Q9BQQ3 440 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 MLPHQ9BV36 600 aaPredicted RBP15.22■□□□□ 0.03
PRKN-201ENST00000338468 BOCQ9BWV1 1114 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 FRMD8Q9BZ67 464 aaPredicted RBP15.22■□□□□ 0.03
PRKN-201ENST00000338468 UBP1Q9NZI7 540 aa15.22■□□□□ 0.03
PRKN-201ENST00000338468 C1orf232A0A0U1RR37 186 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 FAM149AA5PLN7 773 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 MIF4GDA9UHW6 222 aaKnown RBP15.21■□□□□ 0.03
PRKN-201ENST00000338468 F5H423 210 aaPredicted RBP15.21■□□□□ 0.03
PRKN-201ENST00000338468 MTSS1O43312 755 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 PMPCBO75439 489 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 CEACAM5P06731 702 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 PIRTP0C851 137 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 CCZ1BP86790 482 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 CCZ1P86791 482 aaPredicted RBP15.21■□□□□ 0.03
PRKN-201ENST00000338468 ILKQ13418 452 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 RAET1GQ6H3X3 334 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 ADAMTSL4Q6UY14 1074 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 LYSMD3Q7Z3D4 306 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 LRRC8AQ8IWT6 810 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 GALNT15Q8N3T1 639 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 FSTL5Q8N475 847 aaPredicted RBP15.21■□□□□ 0.03
PRKN-201ENST00000338468 ATL2Q8NHH9 583 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 COL26A1Q96A83 441 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 AP2M1Q96CW1 435 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 FCRL5Q96RD9 977 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 VAT1Q99536 393 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 RIOK2Q9BVS4 552 aaKnown RBP15.21■□□□□ 0.03
PRKN-201ENST00000338468 ADGRE3Q9BY15 652 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 PHPT1Q9NRX4 125 aaPredicted RBP15.21■□□□□ 0.03
PRKN-201ENST00000338468 KLHL8Q9P2G9 620 aaPredicted RBP15.21■□□□□ 0.03
PRKN-201ENST00000338468 DNPEPQ9ULA0 475 aa15.21■□□□□ 0.03
PRKN-201ENST00000338468 ASH1LQ9NR48 2969 aaKnown RBP15.21■□□□□ 0.02
PRKN-201ENST00000338468 LOC285095A0A1B0GVY8 99 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 PRSS38A1L453 326 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 H7C0C1 242 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 NDST3O95803 873 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 TNFP01375 233 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 ATP5OP48047 213 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 SPINT3P49223 89 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 WNT3AP56704 352 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 DAB2P98082 770 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 KLF1Q13351 362 aaPredicted RBP15.2■□□□□ 0.02
PRKN-201ENST00000338468 CAMK2BQ13554 666 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 HS1BP3Q53T59 392 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 C6orf132Q5T0Z8 1188 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 CCDC181Q5TID7 509 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 GUSBP11Q6P575 273 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 PID1Q7Z2X4 250 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 SLC35F3Q8IY50 421 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 RAVER1Q8IY67 606 aaKnown RBP15.2■□□□□ 0.02
PRKN-201ENST00000338468 NRSN1Q8IZ57 195 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 CCDC112Q8NEF3 446 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 MRGPRX2Q96LB1 330 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 TMEM168Q9H0V1 697 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 USP29Q9HBJ7 922 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 MAGEE1Q9HCI5 957 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 CYP4F12Q9HCS2 524 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 FAM153AQ9UHL3 310 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 CNOT6Q9ULM6 557 aaKnown RBP15.2■□□□□ 0.02
PRKN-201ENST00000338468 GUCA1BQ9UMX6 200 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 SLC17A4Q9Y2C5 497 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 SPO11Q9Y5K1 396 aa15.2■□□□□ 0.02
PRKN-201ENST00000338468 TCRBV7S2A1N4TA0A589 114 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 GOLGA6CA6NDK9 693 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 GOLGA6BA6NDN3 693 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 TJP3O95049 919 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 ANXA6P08133 673 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 GOLGA6DP0CG33 693 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 RBP3P10745 1247 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 CDK4P11802 303 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 CTSEP14091 401 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 KELP23276 732 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 GPR1P46091 355 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 POLD2P49005 469 aa15.19■□□□□ 0.02
PRKN-201ENST00000338468 EIF3EP60228 445 aaKnown RBP15.19■□□□□ 0.02
PRKN-201ENST00000338468 INSM1Q01101 510 aaPredicted RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms