RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 PPARGP37231 505 aaPredicted RBP23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 CCNHP51946 323 aaPredicted RBP23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 SH3BP2P78314 561 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 SLC14A2Q15849 920 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 PTPRNQ16849 979 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 UNC50Q53HI1 259 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 ALG1LQ6GMV1 187 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 FAM45BPQ6NSW5 357 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 FAM45AQ8TCE6 357 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 TMA16Q96EY4 203 aaKnown RBP23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 TNKS2Q9H2K2 1166 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 UTP6Q9NYH9 597 aaKnown RBP23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 GREM1O60565 184 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 SRP72O76094 671 aaKnown RBP23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 URODP06132 367 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 ANPEPP15144 967 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 TSNQ15631 228 aaKnown RBP23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 BBS5Q8N3I7 341 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 TSPAN17Q96FV3 270 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 RSRC1Q96IZ7 334 aaKnown RBP23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 ZNF599Q96NL3 588 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 ABCG8Q9H221 673 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 IL21Q9HBE4 155 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 COMMD8Q9NX08 183 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 CCDC167Q9P0B6 97 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 STX18Q9P2W9 335 aaKnown RBP23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 STOML1Q9UBI4 398 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 ARHGAP26Q9UNA1 814 aa23.06■■□□□ 1.28
CLPTM1-201ENST00000337392 CKMP06732 381 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 AGTR2P50052 363 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 VEPH1Q14D04 833 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 ZNF678Q5SXM1 525 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 DSELQ8IZU8 1212 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 AARSD1Q9BTE6 412 aaKnown RBP23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 NLE1Q9NVX2 485 aaPredicted RBP23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 ASB1Q9Y576 335 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 NVLO15381 856 aaKnown RBP23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 EPOP01588 193 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 POLD2P49005 469 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 CDH18Q13634 790 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 GEN1Q17RS7 908 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 TRMT5Q32P41 509 aaKnown RBP23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 CNKSR3Q6P9H4 555 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 MYLK4Q86YV6 388 aaPredicted RBP23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 BBS7Q8IWZ6 715 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 ACTRT2Q8TDY3 377 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 DNAJC9Q8WXX5 260 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 LPGAT1Q92604 370 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 CDRT15Q96T59 188 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 ZNF385DQ9H6B1 395 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 LHX3Q9UBR4 397 aa23.05■■□□□ 1.28
CLPTM1-201ENST00000337392 NPHS1O60500 1241 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 ATP5BP06576 529 aaKnown RBP23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 ITGB6P18564 788 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 PRDX3P30048 256 aaKnown RBP23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 RHOAP61586 193 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 PGM2L1Q6PCE3 622 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 PCDH20Q8N6Y1 951 aaKnown RBP23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 TRPC4APQ8TEL6 797 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 DDI1Q8WTU0 396 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 BIRC8Q96P09 236 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 CDK5RAP1Q96SZ6 601 aaKnown RBP23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 EVLQ9UI08 416 aaPredicted RBP23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 RPL26L1Q9UNX3 145 aaKnown RBP23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 A0A1W2PRU2 124 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 NPEPPSL1A6NEC2 478 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 RBP1P09455 135 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 CCNG1P51959 295 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 THOP1P52888 689 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 CYLC2Q14093 348 aaPredicted RBP23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 LRRC73Q5JTD7 316 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 KLHDC10Q6PID8 442 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 LAYNQ6UX15 382 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 UCMAQ8WVF2 138 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 ZNF689Q96CS4 500 aaPredicted RBP23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 ZNF333Q96JL9 665 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 SEMA4BQ9NPR2 832 aaPredicted RBP23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 BTRCQ9Y297 605 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 LRRC42Q9Y546 428 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 TRANK1O15050 2925 aa23.04■■□□□ 1.28
CLPTM1-201ENST00000337392 TRIM43BA6NCK2 446 aa23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 CRTAMO95727 393 aa23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 CNPP09543 421 aaKnown RBP23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 GFAPP14136 432 aa23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 VHLP40337 213 aa23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 DNAJB13P59910 316 aa23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 LRRC26Q2I0M4 334 aa23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 LPCAT4Q643R3 524 aa23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 SCIMPQ6UWF3 145 aa23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 TAS2R42Q7RTR8 314 aa23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 LYSMD3Q7Z3D4 306 aa23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 PAF1Q8N7H5 531 aa23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 TRIM43Q96BQ3 446 aaPredicted RBP23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 CNDP1Q96KN2 507 aa23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 HCFC1R1Q9NWW0 138 aa23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 TRAF6Q9Y4K3 522 aa23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 NDUFS3O75489 264 aa23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 SPRED2Q7Z698 418 aa23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 SDCCAG8Q86SQ7 713 aaPredicted RBP23.03■■□□□ 1.28
CLPTM1-201ENST00000337392 SLC22A17Q8WUG5 538 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms