RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 SLC44A4Q53GD3 710 aa8.83□□□□□ -1
SNCA-201ENST00000336904 CAPRIN2Q6IMN6 1127 aaKnown RBP8.83□□□□□ -1
SNCA-201ENST00000336904 PGM2L1Q6PCE3 622 aa8.83□□□□□ -1
SNCA-201ENST00000336904 FAM151BQ6UXP7 276 aa8.83□□□□□ -1
SNCA-201ENST00000336904 KLHDC8BQ8IXV7 354 aa8.83□□□□□ -1
SNCA-201ENST00000336904 LMNTD2Q8IXW0 634 aa8.83□□□□□ -1
SNCA-201ENST00000336904 CALML6Q8TD86 181 aa8.83□□□□□ -1
SNCA-201ENST00000336904 ECSITQ9BQ95 431 aa8.83□□□□□ -1
SNCA-201ENST00000336904 BOCQ9BWV1 1114 aa8.83□□□□□ -1
SNCA-201ENST00000336904 IL37Q9NZH6 218 aa8.83□□□□□ -1
SNCA-201ENST00000336904 MED16Q9Y2X0 877 aa8.83□□□□□ -1
SNCA-201ENST00000336904 YIPF1Q9Y548 306 aa8.83□□□□□ -1
SNCA-201ENST00000336904 COMMD10Q9Y6G5 202 aa8.83□□□□□ -1
SNCA-201ENST00000336904 PLXNA3P51805 1871 aa8.83□□□□□ -1
SNCA-201ENST00000336904 AP3B1O00203 1094 aa8.83□□□□□ -1
SNCA-201ENST00000336904 FBP2O00757 339 aa8.83□□□□□ -1
SNCA-201ENST00000336904 UBDO15205 165 aa8.83□□□□□ -1
SNCA-201ENST00000336904 INPPL1O15357 1258 aa8.83□□□□□ -1
SNCA-201ENST00000336904 SLC7A4O43246 635 aa8.83□□□□□ -1
SNCA-201ENST00000336904 TBC1D4O60343 1298 aa8.83□□□□□ -1
SNCA-201ENST00000336904 TPST1O60507 370 aa8.83□□□□□ -1
SNCA-201ENST00000336904 KATNA1O75449 491 aa8.83□□□□□ -1
SNCA-201ENST00000336904 NDUFS3O75489 264 aa8.83□□□□□ -1
SNCA-201ENST00000336904 THRAP10827 490 aa8.83□□□□□ -1
SNCA-201ENST00000336904 PSMC3P17980 439 aa8.83□□□□□ -1
SNCA-201ENST00000336904 CSKP41240 450 aa8.83□□□□□ -1
SNCA-201ENST00000336904 STK19P49842 368 aaPredicted RBP8.83□□□□□ -1
SNCA-201ENST00000336904 DSG1Q02413 1049 aa8.83□□□□□ -1
SNCA-201ENST00000336904 POM121L1PQ3SYA9 428 aa8.83□□□□□ -1
SNCA-201ENST00000336904 SETMARQ53H47 684 aaPredicted RBP8.83□□□□□ -1
SNCA-201ENST00000336904 ZNF678Q5SXM1 525 aa8.83□□□□□ -1
SNCA-201ENST00000336904 PIWIL4Q7Z3Z4 852 aaKnown RBP8.83□□□□□ -1
SNCA-201ENST00000336904 IFNEQ86WN2 208 aa8.83□□□□□ -1
SNCA-201ENST00000336904 HS6ST3Q8IZP7 471 aa8.83□□□□□ -1
SNCA-201ENST00000336904 EEF1AKMT1Q8WVE0 214 aa8.83□□□□□ -1
SNCA-201ENST00000336904 ATP6V1E2Q96A05 226 aa8.83□□□□□ -1
SNCA-201ENST00000336904 EID2BQ96D98 161 aa8.83□□□□□ -1
SNCA-201ENST00000336904 RTKNQ9BST9 563 aa8.83□□□□□ -1
SNCA-201ENST00000336904 C1orf21Q9H246 121 aa8.83□□□□□ -1
SNCA-201ENST00000336904 OLA1Q9NTK5 396 aaKnown RBP8.83□□□□□ -1
SNCA-201ENST00000336904 EVLQ9UI08 416 aaPredicted RBP8.83□□□□□ -1
SNCA-201ENST00000336904 MID2Q9UJV3 735 aa8.83□□□□□ -1
SNCA-201ENST00000336904 RNF112Q9ULX5 631 aa8.83□□□□□ -1
SNCA-201ENST00000336904 DNAJC15Q9Y5T4 150 aa8.83□□□□□ -1
SNCA-201ENST00000336904 COL4A4P53420 1690 aaPredicted RBP8.82□□□□□ -1
SNCA-201ENST00000336904 CCNT2O60583 730 aaKnown RBP8.82□□□□□ -1
SNCA-201ENST00000336904 CDK14O94921 469 aa8.82□□□□□ -1
SNCA-201ENST00000336904 NDST3O95803 873 aa8.82□□□□□ -1
SNCA-201ENST00000336904 CD160O95971 181 aa8.82□□□□□ -1
SNCA-201ENST00000336904 MTHFD2P13995 350 aa8.82□□□□□ -1
SNCA-201ENST00000336904 ACADSP16219 412 aa8.82□□□□□ -1
SNCA-201ENST00000336904 UGT1A6P19224 532 aa8.82□□□□□ -1
SNCA-201ENST00000336904 UGT1A1P22309 533 aa8.82□□□□□ -1
SNCA-201ENST00000336904 UGT1A4P22310 534 aa8.82□□□□□ -1
SNCA-201ENST00000336904 ITGB8P26012 769 aa8.82□□□□□ -1
SNCA-201ENST00000336904 UGT1A3P35503 534 aa8.82□□□□□ -1
SNCA-201ENST00000336904 UGT1A5P35504 534 aa8.82□□□□□ -1
SNCA-201ENST00000336904 VEGFBP49765 207 aa8.82□□□□□ -1
SNCA-201ENST00000336904 STC1P52823 247 aa8.82□□□□□ -1
SNCA-201ENST00000336904 DIO3P55073 304 aa8.82□□□□□ -1
SNCA-201ENST00000336904 BFSP2Q13515 415 aa8.82□□□□□ -1
SNCA-201ENST00000336904 PTK2BQ14289 1009 aa8.82□□□□□ -1
SNCA-201ENST00000336904 FRG1Q14331 258 aaKnown RBP8.82□□□□□ -1
SNCA-201ENST00000336904 DBN1Q16643 649 aa8.82□□□□□ -1
SNCA-201ENST00000336904 NRF1Q16656 503 aa8.82□□□□□ -1
SNCA-201ENST00000336904 USP41Q3LFD5 358 aa8.82□□□□□ -1
SNCA-201ENST00000336904 VPS26BQ4G0F5 336 aa8.82□□□□□ -1
SNCA-201ENST00000336904 CXorf57Q6NSI4 855 aaKnown RBP8.82□□□□□ -1
SNCA-201ENST00000336904 MRNIPQ6NTE8 343 aa8.82□□□□□ -1
SNCA-201ENST00000336904 LYSMD3Q7Z3D4 306 aa8.82□□□□□ -1
SNCA-201ENST00000336904 CEP70Q8NHQ1 597 aa8.82□□□□□ -1
SNCA-201ENST00000336904 RDH11Q8TC12 318 aa8.82□□□□□ -1
SNCA-201ENST00000336904 BRSK1Q8TDC3 778 aa8.82□□□□□ -1
SNCA-201ENST00000336904 VPS33AQ96AX1 596 aa8.82□□□□□ -1
SNCA-201ENST00000336904 SIKE1Q9BRV8 207 aa8.82□□□□□ -1
SNCA-201ENST00000336904 CCDC68Q9H2F9 335 aa8.82□□□□□ -1
SNCA-201ENST00000336904 STN1Q9H668 368 aaKnown RBP8.82□□□□□ -1
SNCA-201ENST00000336904 AKTIPQ9H8T0 292 aa8.82□□□□□ -1
SNCA-201ENST00000336904 TRPM5Q9NZQ8 1165 aa8.82□□□□□ -1
SNCA-201ENST00000336904 CIDEBQ9UHD4 219 aa8.82□□□□□ -1
SNCA-201ENST00000336904 EGFL7Q9UHF1 273 aa8.82□□□□□ -1
SNCA-201ENST00000336904 MYO15AQ9UKN7 3530 aa8.82□□□□□ -1
SNCA-201ENST00000336904 PEX1O43933 1283 aa8.82□□□□□ -1
SNCA-201ENST00000336904 CLASP2O75122 1294 aaKnown RBP8.82□□□□□ -1
SNCA-201ENST00000336904 ECI2O75521 394 aa8.82□□□□□ -1
SNCA-201ENST00000336904 MT-ND1P03886 318 aa8.82□□□□□ -1
SNCA-201ENST00000336904 FGF1P05230 155 aa8.82□□□□□ -1
SNCA-201ENST00000336904 ALDH1A3P47895 512 aa8.82□□□□□ -1
SNCA-201ENST00000336904 NRG1Q02297 640 aaPredicted RBP8.82□□□□□ -1
SNCA-201ENST00000336904 FBXL19Q6PCT2 694 aa8.82□□□□□ -1
SNCA-201ENST00000336904 RFLNAQ6ZTI6 216 aa8.82□□□□□ -1
SNCA-201ENST00000336904 OTOP2Q7RTS6 562 aa8.82□□□□□ -1
SNCA-201ENST00000336904 DNAJB7Q7Z6W7 309 aaPredicted RBP8.82□□□□□ -1
SNCA-201ENST00000336904 LILRA2Q8N149 483 aa8.82□□□□□ -1
SNCA-201ENST00000336904 LRRC43Q8N309 656 aa8.82□□□□□ -1
SNCA-201ENST00000336904 SLC43A3Q8NBI5 491 aa8.82□□□□□ -1
SNCA-201ENST00000336904 PTCD2Q8WV60 388 aaKnown RBP8.82□□□□□ -1
SNCA-201ENST00000336904 TUBGCP3Q96CW5 907 aa8.82□□□□□ -1
SNCA-201ENST00000336904 IGSF21Q96ID5 467 aa8.82□□□□□ -1
SNCA-201ENST00000336904 TRIB3Q96RU7 358 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms