RNA–Protein interactions for RNA: ENST00000336328.10

CMTM1-204, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 606 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-204ENST00000336328 ZDHHC1Q8WTX9 485 aa17.69■□□□□ 0.42
CMTM1-204ENST00000336328 HDAC11Q96DB2 347 aa17.69■□□□□ 0.42
CMTM1-204ENST00000336328 ADGRE3Q9BY15 652 aa17.69■□□□□ 0.42
CMTM1-204ENST00000336328 CDH19Q9H159 772 aa17.69■□□□□ 0.42
CMTM1-204ENST00000336328 ABCG8Q9H221 673 aa17.69■□□□□ 0.42
CMTM1-204ENST00000336328 PCDH9Q9HC56 1237 aa17.69■□□□□ 0.42
CMTM1-204ENST00000336328 SUFUQ9UMX1 484 aa17.69■□□□□ 0.42
CMTM1-204ENST00000336328 PCDHGA7Q9Y5G6 932 aa17.69■□□□□ 0.42
CMTM1-204ENST00000336328 A0A1W2PNU3 283 aaPredicted RBP17.68■□□□□ 0.42
CMTM1-204ENST00000336328 RGSL1A5PLK6 1076 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 JMJD7P0C870 316 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 GPR3P46089 330 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 GNPDA1P46926 289 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 TAS2R40P59535 323 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 SKOR1P84550 965 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 KCTD16Q68DU8 428 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 NYAP1Q6ZVC0 841 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 SPRED1Q7Z699 444 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 PIM3Q86V86 326 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 C17orf82Q86X59 251 aaPredicted RBP17.68■□□□□ 0.42
CMTM1-204ENST00000336328 CCL4L1Q8NHW4 92 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 SLC39A7Q92504 469 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 WBP1Q96G27 269 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 SCARF2Q96GP6 870 aaPredicted RBP17.68■□□□□ 0.42
CMTM1-204ENST00000336328 BBC3Q96PG8 261 aaPredicted RBP17.68■□□□□ 0.42
CMTM1-204ENST00000336328 CMKLR1Q99788 373 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 TDRD1Q9BXT4 1180 aaKnown RBP17.68■□□□□ 0.42
CMTM1-204ENST00000336328 BRD8Q9H0E9 1235 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 SPATS2LQ9NUQ6 558 aaKnown RBP17.68■□□□□ 0.42
CMTM1-204ENST00000336328 TAAR2Q9P1P5 351 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 CHKBQ9Y259 395 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 RNF215Q9Y6U7 377 aa17.68■□□□□ 0.42
CMTM1-204ENST00000336328 BAHCC1Q9P281 2608 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 LRRD1A4D1F6 860 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 CPNE6O95741 557 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 JCHAINP01591 159 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 FGF1P05230 155 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 UGT1A5P35504 534 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 ADCY8P40145 1251 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 SLC1A1P43005 524 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 PDX1P52945 283 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 CTBSQ01459 385 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 DSC2Q02487 901 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 GBE1Q04446 702 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 ZFP36L1Q07352 338 aaKnown RBP17.67■□□□□ 0.42
CMTM1-204ENST00000336328 VAC14Q08AM6 782 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 C19orf57Q0VDD7 668 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 LRP8Q14114 963 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 LRRC38Q5VT99 294 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 BZW1Q7L1Q6 419 aaKnown RBP17.67■□□□□ 0.42
CMTM1-204ENST00000336328 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.67■□□□□ 0.42
CMTM1-204ENST00000336328 PQLC3Q8N755 202 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 ARRDC2Q8TBH0 407 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 LYSMD1Q96S90 227 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 DPYSL5Q9BPU6 564 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 MLPHQ9BV36 600 aaPredicted RBP17.67■□□□□ 0.42
CMTM1-204ENST00000336328 PACSIN1Q9BY11 444 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 SUDS3Q9H7L9 328 aaPredicted RBP17.67■□□□□ 0.42
CMTM1-204ENST00000336328 DTLQ9NZJ0 730 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 INTUQ9ULD6 942 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 SSUH2Q9Y2M2 353 aa17.67■□□□□ 0.42
CMTM1-204ENST00000336328 ANKRD66B4E2M5 251 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 ERVH48-1M5A8F1 160 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 NVLO15381 856 aaKnown RBP17.66■□□□□ 0.42
CMTM1-204ENST00000336328 MAP3K6O95382 1288 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 FUCA1P04066 466 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 STC1P52823 247 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 B4GALNT1Q00973 533 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 PPIDQ08752 370 aaKnown RBP17.66■□□□□ 0.42
CMTM1-204ENST00000336328 PDK1Q15118 436 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 ARHGAP40Q5TG30 622 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 TMEM164Q5U3C3 297 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 B3GNT8Q7Z7M8 397 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 NRROSQ86YC3 692 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 JAMLQ86YT9 394 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 CNGA4Q8IV77 575 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 VSTM4Q8IW00 320 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 SNRNP27Q8WVK2 155 aaKnown RBP17.66■□□□□ 0.42
CMTM1-204ENST00000336328 RAPGEF5Q92565 580 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 FOXP3Q9BZS1 431 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 B3GNT4Q9C0J1 378 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 TSPY26PQ9H489 355 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 NHEJ1Q9H9Q4 299 aaPredicted RBP17.66■□□□□ 0.42
CMTM1-204ENST00000336328 ABHD10Q9NUJ1 306 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 DDX56Q9NY93 547 aaKnown RBP17.66■□□□□ 0.42
CMTM1-204ENST00000336328 PKD2L2Q9NZM6 624 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 CD84Q9UIB8 345 aa17.66■□□□□ 0.42
CMTM1-204ENST00000336328 COL27A1Q8IZC6 1860 aaPredicted RBP17.66■□□□□ 0.42
CMTM1-204ENST00000336328 PPP1R12AO14974 1030 aaPredicted RBP17.65■□□□□ 0.42
CMTM1-204ENST00000336328 MTA2O94776 668 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 CLDN7O95471 211 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 ASMTLO95671 621 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 ECEL1O95672 775 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 PRLP01236 227 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 HLA-DQB2P05538 268 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 ALDH4A1P30038 563 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 SLC5A2P31639 672 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 IFI35P80217 286 aaPredicted RBP17.65■□□□□ 0.42
CMTM1-204ENST00000336328 NIPAL4Q0D2K0 466 aa17.65■□□□□ 0.42
CMTM1-204ENST00000336328 SLC10A2Q12908 348 aaPredicted RBP17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms