RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 PLD4Q96BZ4 506 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 FEM1CQ96JP0 617 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 GPR63Q9BZJ6 419 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 MFSD1Q9H3U5 465 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 ABCB8Q9NUT2 735 aa12.57□□□□□ -0.4
LIMK1-201ENST00000336180 COL4A4P53420 1690 aaPredicted RBP12.57□□□□□ -0.4
LIMK1-201ENST00000336180 AP3B1O00203 1094 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 STX7O15400 261 aaKnown RBP12.56□□□□□ -0.4
LIMK1-201ENST00000336180 CHRM3P20309 590 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 CRABP2P29373 138 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 C1QTNF8P60827 252 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 POU4F1Q01851 419 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 SMARCB1Q12824 385 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 C16orf87Q6PH81 154 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 EPGNQ6UW88 154 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 HPS6Q86YV9 775 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 PTGR2Q8N8N7 351 aaPredicted RBP12.56□□□□□ -0.4
LIMK1-201ENST00000336180 MRPS31Q92665 395 aaKnown RBP12.56□□□□□ -0.4
LIMK1-201ENST00000336180 ZNF333Q96JL9 665 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 SLX1AQ9BQ83 275 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 NSMCE4AQ9NXX6 385 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 ILVBLA1L0T0 632 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 ANTXRLA6NF34 631 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 SUPT3HB4E1H0 165 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 ANKRD66B4E2M5 251 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 SLC7A4O43246 635 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 SUPT3HO75486 399 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 TIMP1P01033 207 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 GFAPP14136 432 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 HLA-DPA1P20036 260 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 LMAN2Q12907 356 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 ISCA2Q86U28 154 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 TMEM25Q86YD3 366 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 C12orf76Q8N812 135 aaPredicted RBP12.56□□□□□ -0.4
LIMK1-201ENST00000336180 DDX51Q8N8A6 666 aaKnown RBP eCLIP12.56□□□□□ -0.4
LIMK1-201ENST00000336180 KREMEN2Q8NCW0 462 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 OR9I1Q8NGQ6 314 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 OR6Y1Q8NGX8 325 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 GRIN3AQ8TCU5 1115 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 PYDC1Q8WXC3 89 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 DRC3Q9H069 523 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 SEMA4BQ9NPR2 832 aaPredicted RBP12.56□□□□□ -0.4
LIMK1-201ENST00000336180 SLCO3A1Q9UIG8 710 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 SSX2IPQ9Y2D8 614 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 TIMM22Q9Y584 194 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 USP34Q70CQ2 3546 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 NEDD8-MDP1E9PL57 170 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 LUC7L3O95232 432 aaKnown RBP12.56□□□□□ -0.4
LIMK1-201ENST00000336180 CLDN7O95471 211 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 ENO3P13929 434 aaPredicted RBP12.56□□□□□ -0.4
LIMK1-201ENST00000336180 NUDT2P50583 147 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 KLF10Q13118 480 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 C1orf146Q5VVC0 180 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 GK5Q6ZS86 529 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 ULK2Q8IYT8 1036 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 FIBCD1Q8N539 461 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 CALML6Q8TD86 181 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 TRPC4APQ8TEL6 797 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 SREK1Q8WXA9 508 aaKnown RBP12.56□□□□□ -0.4
LIMK1-201ENST00000336180 NPAS2Q99743 824 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 C17orf80Q9BSJ5 609 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 LHX3Q9UBR4 397 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 SUN2Q9UH99 717 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 SLC7A8Q9UHI5 535 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 CD84Q9UIB8 345 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 LNPEPQ9UIQ6 1025 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 MCM8Q9UJA3 840 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 INTS6Q9UL03 887 aaKnown RBP12.56□□□□□ -0.4
LIMK1-201ENST00000336180 ASB1Q9Y576 335 aa12.56□□□□□ -0.4
LIMK1-201ENST00000336180 ABHD14A-ACY1A0A1B0GW23 586 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 GREM1O60565 184 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 LAG3P18627 525 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 CTNNB1P35222 781 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 CLCN5P51795 746 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 ASPHQ12797 758 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 TEAD2Q15562 447 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 AGAP9Q5VTM2 703 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 MRNIPQ6NTE8 343 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 ISLR2Q6UXK2 745 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 RIPOR1Q6ZS17 1223 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 ZSWIM9Q86XI8 627 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 CPNE9Q8IYJ1 553 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 TOX2Q96NM4 488 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 CDK15Q96Q40 435 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 PANX3Q96QZ0 392 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 MRPL57Q9BQC6 102 aaKnown RBP12.55□□□□□ -0.4
LIMK1-201ENST00000336180 TRIM8Q9BZR9 551 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 ANKRD6Q9Y2G4 727 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 RAP2CQ9Y3L5 183 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 MATN2O00339 956 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 EN2P19622 333 aaPredicted RBP12.55□□□□□ -0.4
LIMK1-201ENST00000336180 CR2P20023 1033 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 PRDX3P30048 256 aaKnown RBP12.55□□□□□ -0.4
LIMK1-201ENST00000336180 COPAP53621 1224 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 HABP4Q5JVS0 413 aaKnown RBP12.55□□□□□ -0.4
LIMK1-201ENST00000336180 TPGS2Q68CL5 300 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 DDX53Q86TM3 631 aaKnown RBP12.55□□□□□ -0.4
LIMK1-201ENST00000336180 CUZD1Q86UP6 607 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 SCUBE1Q8IWY4 988 aa12.55□□□□□ -0.4
LIMK1-201ENST00000336180 TADA1Q96BN2 335 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms