RNA–Protein interactions for RNA: ENST00000334490.5

C9orf47-201, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C9orf47, Length 4,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-201ENST00000334490 C1orf50Q9BV19 199 aa14.99□□□□□ -0.01
C9orf47-201ENST00000334490 BIRC5O15392 142 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 CNMDO75829 334 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 EPHA3P29320 983 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 TIE1P35590 1138 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 CHRNA4P43681 627 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 SERPINB10P48595 397 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 BLVRAP53004 296 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 ZNHIT3Q15649 155 aaPredicted RBP14.98□□□□□ -0.01
C9orf47-201ENST00000334490 CARD16Q5EG05 197 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 KRT73Q86Y46 540 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 KLHL23Q8NBE8 558 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 LRRC15Q8TF66 581 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 ADAMTS10Q9H324 1103 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 NUP188Q5SRE5 1749 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 ILVBLA1L0T0 632 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 SCAMP1O15126 338 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 KCNH1O95259 989 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 LINC00032P0C843 101 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 ADH5P11766 374 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 DDX6P26196 483 aaKnown RBP eCLIP14.98□□□□□ -0.01
C9orf47-201ENST00000334490 NMBRP28336 390 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 PKNOX1P55347 436 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 RUNX1T1Q06455 604 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 RFTN1Q14699 578 aaPredicted RBP14.98□□□□□ -0.01
C9orf47-201ENST00000334490 TEAD2Q15562 447 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 FGD3Q5JSP0 725 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 CAMK1DQ8IU85 385 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 TMCO5AQ8N6Q1 288 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 CMASQ8NFW8 434 aaPredicted RBP14.98□□□□□ -0.01
C9orf47-201ENST00000334490 CD101Q93033 1021 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 GOT2P00505 430 aaKnown RBP14.98□□□□□ -0.01
C9orf47-201ENST00000334490 GDF10P55107 478 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 ALFQ53S48 1182 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 ICE2Q659A1 982 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 SLC39A5Q6ZMH5 540 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 KIAA0408Q6ZU52 694 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 UTP15Q8TED0 518 aaKnown RBP14.98□□□□□ -0.01
C9orf47-201ENST00000334490 CYP2S1Q96SQ9 504 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 SLCO1B3Q9NPD5 702 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 GTF2A1LQ9UNN4 478 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 ALS2Q96Q42 1657 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 IQCF5A8MTL0 148 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 DEAF1O75398 565 aaPredicted RBP14.98□□□□□ -0.01
C9orf47-201ENST00000334490 ATP6V1B1P15313 513 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 PRKG2Q13237 762 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 NAE1Q13564 534 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 MORN1Q5T089 497 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 OLFML1Q6UWY5 402 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 TRIM69Q86WT6 500 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 PRRG3Q9BZD7 231 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 ATG10Q9H0Y0 220 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 IGSF9Q9P2J2 1179 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 SLC17A7Q9P2U7 560 aa14.98□□□□□ -0.01
C9orf47-201ENST00000334490 LYPLA1O75608 230 aaPredicted RBP14.97□□□□□ -0.01
C9orf47-201ENST00000334490 DSG1Q02413 1049 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 ASTE1Q2TB18 679 aaPredicted RBP14.97□□□□□ -0.01
C9orf47-201ENST00000334490 ZNF366Q8N895 744 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 CENPTQ96BT3 561 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 NXNL1Q96CM4 212 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 TRMOQ9BU70 441 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 BDH2Q9BUT1 245 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 PHACTR1Q9C0D0 580 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 SMOC2Q9H3U7 446 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 OR10H1Q9Y4A9 318 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 HS6ST1O60243 411 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 NOS3P29474 1203 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 RPL3P39023 403 aaKnown RBP14.97□□□□□ -0.01
C9orf47-201ENST00000334490 UPP1Q16831 310 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 CHST15Q7LFX5 561 aaPredicted RBP14.97□□□□□ -0.01
C9orf47-201ENST00000334490 TMPRSS11BQ86T26 416 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 ST13P5Q8NFI4 369 aaPredicted RBP14.97□□□□□ -0.01
C9orf47-201ENST00000334490 AARSD1Q9BTE6 412 aaKnown RBP14.97□□□□□ -0.01
C9orf47-201ENST00000334490 GPR62Q9BZJ7 368 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 ZDHHC4Q9NPG8 344 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 CIDEBQ9UHD4 219 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 SNX3O60493 162 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 STK16O75716 305 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 LDLRP01130 860 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 CHRNA1P02708 482 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 SSR2P43308 183 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 CYP4F2P78329 520 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 SLC10A7Q0GE19 358 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 TXNRD3NBQ6F5E7 133 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 CHSY3Q70JA7 882 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 GPR180Q86V85 440 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 HMGB4Q8WW32 186 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 MS4A4AQ96JQ5 239 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 HS3ST4Q9Y661 456 aa14.97□□□□□ -0.01
C9orf47-201ENST00000334490 DNAJC25-GNG10A0A024R161 153 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 RASSF10A6NK89 507 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 SNAP91O60641 907 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 SNRPB2P08579 225 aaKnown RBP14.96□□□□□ -0.01
C9orf47-201ENST00000334490 ENO2P09104 434 aaPredicted RBP14.96□□□□□ -0.01
C9orf47-201ENST00000334490 CNPP09543 421 aaKnown RBP14.96□□□□□ -0.01
C9orf47-201ENST00000334490 MAGEA11P43364 429 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 DGKEP52429 567 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 DEPDC1Q5TB30 811 aa14.96□□□□□ -0.01
C9orf47-201ENST00000334490 DRICH1Q6PGQ1 229 aaPredicted RBP14.96□□□□□ -0.01
C9orf47-201ENST00000334490 TMEM220Q6QAJ8 160 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms