RNA–Protein interactions for RNA: ENST00000333213.10

TSEN54-201, Transcript of tRNA splicing endonuclease subunit 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSEN54, Length 1,944 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSEN54-201ENST00000333213 HCAR2Q8TDS4 363 aa23.21■■□□□ 1.31
TSEN54-201ENST00000333213 SRPK1Q96SB4 655 aaKnown RBP23.21■■□□□ 1.31
TSEN54-201ENST00000333213 RHOJQ9H4E5 214 aa23.21■■□□□ 1.31
TSEN54-201ENST00000333213 C8orf33Q9H7E9 229 aaPredicted RBP23.21■■□□□ 1.31
TSEN54-201ENST00000333213 SUN2Q9UH99 717 aa23.21■■□□□ 1.31
TSEN54-201ENST00000333213 PKP3Q9Y446 797 aa23.21■■□□□ 1.31
TSEN54-201ENST00000333213 UPK3BL1B0FP48 263 aa23.21■■□□□ 1.31
TSEN54-201ENST00000333213 LOC730098B7Z3J9 87 aa23.21■■□□□ 1.31
TSEN54-201ENST00000333213 UPK3BL2E5RIL1 263 aa23.21■■□□□ 1.31
TSEN54-201ENST00000333213 S1PR4O95977 384 aa23.21■■□□□ 1.31
TSEN54-201ENST00000333213 BPIP17213 487 aa23.21■■□□□ 1.31
TSEN54-201ENST00000333213 MC4RP32245 332 aa23.21■■□□□ 1.31
TSEN54-201ENST00000333213 PGGT1BP53609 377 aa23.21■■□□□ 1.31
TSEN54-201ENST00000333213 SLC18A2Q05940 514 aa23.21■■□□□ 1.31
TSEN54-201ENST00000333213 KIAA0408Q6ZU52 694 aa23.21■■□□□ 1.31
TSEN54-201ENST00000333213 PIANPQ8IYJ0 282 aa23.21■■□□□ 1.31
TSEN54-201ENST00000333213 SGSM3Q96HU1 749 aa23.21■■□□□ 1.31
TSEN54-201ENST00000333213 SMC6Q96SB8 1091 aa23.21■■□□□ 1.31
TSEN54-201ENST00000333213 CATSPERZQ9NTU4 200 aa23.21■■□□□ 1.31
TSEN54-201ENST00000333213 PLK4O00444 970 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 TPP1O14773 563 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 SPINT1O43278 529 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 IL1BP01584 269 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 CA5AP35218 305 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 HADHAP40939 763 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 PSAPL1Q6NUJ1 521 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 AFTPHQ6ULP2 937 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 NDUFAF2Q8N183 169 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 BANPQ8N9N5 519 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 FAM96AQ9H5X1 160 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 CAB39LQ9H9S4 337 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 GOLGA8CPA6NN73 597 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 C1SP09871 688 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 GMPRP36959 345 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 RALGDSQ12967 914 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 CAMK2GQ13555 558 aaPredicted RBP23.2■■□□□ 1.3
TSEN54-201ENST00000333213 TDGQ13569 410 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 CKAP5Q14008 2032 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 CPLX4Q7Z7G2 160 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 CMC1Q7Z7K0 106 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 LMNTD2Q8IXW0 634 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 IL17RCQ8NAC3 791 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 ISL2Q96A47 359 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 ZNF317Q96PQ6 595 aaPredicted RBP23.2■■□□□ 1.3
TSEN54-201ENST00000333213 GPR22Q99680 433 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 KCNK9Q9NPC2 374 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 IL26Q9NPH9 171 aa23.2■■□□□ 1.3
TSEN54-201ENST00000333213 ADAM23O75077 832 aa23.19■■□□□ 1.3
TSEN54-201ENST00000333213 SRFP11831 508 aa23.19■■□□□ 1.3
TSEN54-201ENST00000333213 CHN1P15882 459 aa23.19■■□□□ 1.3
TSEN54-201ENST00000333213 CD72P21854 359 aa23.19■■□□□ 1.3
TSEN54-201ENST00000333213 ITGB7P26010 798 aa23.19■■□□□ 1.3
TSEN54-201ENST00000333213 ITIH4Q14624 930 aa23.19■■□□□ 1.3
TSEN54-201ENST00000333213 TYSND1Q2T9J0 566 aa23.19■■□□□ 1.3
TSEN54-201ENST00000333213 KIAA1211LQ6NV74 962 aa23.19■■□□□ 1.3
TSEN54-201ENST00000333213 CDHR3Q6ZTQ4 885 aa23.19■■□□□ 1.3
TSEN54-201ENST00000333213 SPNS2Q8IVW8 549 aa23.19■■□□□ 1.3
TSEN54-201ENST00000333213 GPR26Q8NDV2 337 aa23.19■■□□□ 1.3
TSEN54-201ENST00000333213 C12orf65Q9H3J6 166 aaKnown RBP23.19■■□□□ 1.3
TSEN54-201ENST00000333213 SLC2A4RGQ9NR83 387 aa23.19■■□□□ 1.3
TSEN54-201ENST00000333213 ITM2BQ9Y287 266 aa23.19■■□□□ 1.3
TSEN54-201ENST00000333213 PRPF4O43172 522 aaKnown RBP eCLIP23.18■■□□□ 1.3
TSEN54-201ENST00000333213 TOP3BO95985 862 aaKnown RBP23.18■■□□□ 1.3
TSEN54-201ENST00000333213 RPA3P35244 121 aaPredicted RBP23.18■■□□□ 1.3
TSEN54-201ENST00000333213 MAGEA12P43365 314 aa23.18■■□□□ 1.3
TSEN54-201ENST00000333213 CD151P48509 253 aa23.18■■□□□ 1.3
TSEN54-201ENST00000333213 CSRP3P50461 194 aa23.18■■□□□ 1.3
TSEN54-201ENST00000333213 STC1P52823 247 aa23.18■■□□□ 1.3
TSEN54-201ENST00000333213 DNAJC3Q13217 504 aa23.18■■□□□ 1.3
TSEN54-201ENST00000333213 PPM1JQ5JR12 505 aa23.18■■□□□ 1.3
TSEN54-201ENST00000333213 MRNIPQ6NTE8 343 aa23.18■■□□□ 1.3
TSEN54-201ENST00000333213 GALNT7Q86SF2 657 aa23.18■■□□□ 1.3
TSEN54-201ENST00000333213 ATXN2LQ8WWM7 1075 aaKnown RBP23.18■■□□□ 1.3
TSEN54-201ENST00000333213 C19orf43Q9BQ61 176 aa23.18■■□□□ 1.3
TSEN54-201ENST00000333213 NPC1O15118 1278 aa23.18■■□□□ 1.3
TSEN54-201ENST00000333213 DRD1P21728 446 aa23.18■■□□□ 1.3
TSEN54-201ENST00000333213 VIPR1P32241 457 aa23.18■■□□□ 1.3
TSEN54-201ENST00000333213 CCNFP41002 786 aa23.18■■□□□ 1.3
TSEN54-201ENST00000333213 RBM20Q5T481 1227 aaKnown RBP23.18■■□□□ 1.3
TSEN54-201ENST00000333213 FAM151BQ6UXP7 276 aa23.18■■□□□ 1.3
TSEN54-201ENST00000333213 GABRG3Q99928 467 aa23.18■■□□□ 1.3
TSEN54-201ENST00000333213 MLXIPLQ9NP71 852 aa23.18■■□□□ 1.3
TSEN54-201ENST00000333213 SNX15Q9NRS6 342 aa23.18■■□□□ 1.3
TSEN54-201ENST00000333213 ZNF106Q9H2Y7 1883 aaKnown RBP23.17■■□□□ 1.3
TSEN54-201ENST00000333213 OGNP20774 298 aaKnown RBP23.17■■□□□ 1.3
TSEN54-201ENST00000333213 MMP12P39900 470 aa23.17■■□□□ 1.3
TSEN54-201ENST00000333213 PFKPQ01813 784 aa23.17■■□□□ 1.3
TSEN54-201ENST00000333213 GRSF1Q12849 480 aaKnown RBP eCLIP23.17■■□□□ 1.3
TSEN54-201ENST00000333213 PDE1CQ14123 709 aaPredicted RBP23.17■■□□□ 1.3
TSEN54-201ENST00000333213 SLC44A4Q53GD3 710 aa23.17■■□□□ 1.3
TSEN54-201ENST00000333213 FASTKD1Q53R41 847 aaKnown RBP23.17■■□□□ 1.3
TSEN54-201ENST00000333213 HSD11B1LQ7Z5J1 315 aa23.17■■□□□ 1.3
TSEN54-201ENST00000333213 CBARPQ8N350 705 aaPredicted RBP23.17■■□□□ 1.3
TSEN54-201ENST00000333213 DENND1AQ8TEH3 1009 aa23.17■■□□□ 1.3
TSEN54-201ENST00000333213 CCT6BQ92526 530 aa23.17■■□□□ 1.3
TSEN54-201ENST00000333213 PBXIP1Q96AQ6 731 aa23.17■■□□□ 1.3
TSEN54-201ENST00000333213 NDNQ99608 321 aa23.17■■□□□ 1.3
TSEN54-201ENST00000333213 RSPH9Q9H1X1 276 aaPredicted RBP23.17■■□□□ 1.3
TSEN54-201ENST00000333213 SSU72Q9NP77 194 aaKnown RBP23.17■■□□□ 1.3
TSEN54-201ENST00000333213 KLC4Q9NSK0 619 aa23.17■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms