RNA–Protein interactions for RNA: ENST00000330588.4

SMG1-201, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5 BASIC

Gene SMG1, Length 1,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-201ENST00000330588 HTRA2O43464 458 aaPredicted RBP6.37□□□□□ -1.39
SMG1-201ENST00000330588 PALMO75781 387 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 PIAS2O75928 621 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 PROSCO94903 275 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 KRT7P08729 469 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 CR2P20023 1033 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 DGKAP23743 735 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 IL1R2P27930 398 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 TEAD1P28347 426 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 HNF1BP35680 557 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 MMP12P39900 470 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 DUSP3P51452 185 aaPredicted RBP6.37□□□□□ -1.39
SMG1-201ENST00000330588 ARSEP51690 589 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 HADHBP55084 474 aaKnown RBP6.37□□□□□ -1.39
SMG1-201ENST00000330588 CDH6P55285 790 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 MTM1Q13496 603 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 PAFAH1B3Q15102 231 aaKnown RBP6.37□□□□□ -1.39
SMG1-201ENST00000330588 NFKBIBQ15653 356 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 UGP2Q16851 508 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 POM121L1PQ3SYA9 428 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 CCDC122Q5T0U0 273 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 ATXN7L2Q5T6C5 722 aaPredicted RBP6.37□□□□□ -1.39
SMG1-201ENST00000330588 LRRC38Q5VT99 294 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 SEL1L3Q68CR1 1132 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 TIGD7Q6NT04 549 aaPredicted RBP6.37□□□□□ -1.39
SMG1-201ENST00000330588 ERAP2Q6P179 960 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 LVRNQ6Q4G3 990 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 MACC1Q6ZN28 852 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 TTC7BQ86TV6 843 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 ZNF354CQ86Y25 554 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 TEX26Q8N6G2 289 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 NPWQ8N729 165 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 ZNF564Q8TBZ8 553 aaPredicted RBP6.37□□□□□ -1.39
SMG1-201ENST00000330588 CXorf40AQ8TE69 158 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 CTNNBL1Q8WYA6 563 aaPredicted RBP6.37□□□□□ -1.39
SMG1-201ENST00000330588 GRAMD1AQ96CP6 724 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 FAF2Q96CS3 445 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 CNDP2Q96KP4 475 aaKnown RBP6.37□□□□□ -1.39
SMG1-201ENST00000330588 TSGA13Q96PP4 275 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 NUDCD1Q96RS6 583 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.37□□□□□ -1.39
SMG1-201ENST00000330588 CINPQ9BW66 212 aaPredicted RBP6.37□□□□□ -1.39
SMG1-201ENST00000330588 KRTAP4-7Q9BYR0 210 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 TRIM7Q9C029 511 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 PCDH18Q9HCL0 1135 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 GPATCH2LQ9NWQ4 482 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 PCSK1NQ9UHG2 260 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 IPO11Q9UI26 975 aaKnown RBP6.37□□□□□ -1.39
SMG1-201ENST00000330588 KLK13Q9UKR3 277 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 DNPEPQ9ULA0 475 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 ATP8A1Q9Y2Q0 1164 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 PPIL1Q9Y3C6 166 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 ACTL7AQ9Y615 435 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 CFAP54Q96N23 3096 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 TRPM6Q9BX84 2022 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 VPS13AQ96RL7 3174 aa6.37□□□□□ -1.39
SMG1-201ENST00000330588 IGLON5A6NGN9 336 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 J3KR12 359 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 PSMD11O00231 422 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 TNFRSF10CO14798 259 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 SCAMP1O15126 338 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 TPD52L2O43399 206 aaKnown RBP6.36□□□□□ -1.39
SMG1-201ENST00000330588 MAFKO60675 156 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 MFAP3LO75121 409 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 PEX11BO96011 259 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 ATXN1LP0C7T5 689 aaKnown RBP6.36□□□□□ -1.39
SMG1-201ENST00000330588 CKMT1AP12532 417 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 PRLRP16471 622 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 XPAP23025 273 aaPredicted RBP6.36□□□□□ -1.39
SMG1-201ENST00000330588 CCNCP24863 283 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 EIF4A3P38919 411 aaKnown RBP6.36□□□□□ -1.39
SMG1-201ENST00000330588 BLKP51451 505 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 BCL2L1Q07817 233 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 GALNT2Q10471 571 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 FZD2Q14332 565 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 SLC14A2Q15849 920 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 PPP6R3Q5H9R7 873 aaPredicted RBP6.36□□□□□ -1.39
SMG1-201ENST00000330588 ZCCHC8Q6NZY4 707 aaKnown RBP6.36□□□□□ -1.39
SMG1-201ENST00000330588 Q6ZSR6 202 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 DPPA4Q7L190 304 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 PTAR1Q7Z6K3 402 aaPredicted RBP6.36□□□□□ -1.39
SMG1-201ENST00000330588 SLC22A18ASQ8N1D0 253 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 FSTL5Q8N475 847 aaPredicted RBP6.36□□□□□ -1.39
SMG1-201ENST00000330588 RYBPQ8N488 228 aaPredicted RBP6.36□□□□□ -1.39
SMG1-201ENST00000330588 CHCHD4Q8N4Q1 142 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 ATPAF2Q8N5M1 289 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 TP53I13Q8NBR0 393 aaPredicted RBP6.36□□□□□ -1.39
SMG1-201ENST00000330588 WDR48Q8TAF3 677 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 NSMCE1Q8WV22 266 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 ABHD10Q9NUJ1 306 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.36□□□□□ -1.39
SMG1-201ENST00000330588 SPASTQ9UBP0 616 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 GPN3Q9UHW5 284 aaPredicted RBP6.36□□□□□ -1.39
SMG1-201ENST00000330588 DCHS1Q96JQ0 3298 aa6.36□□□□□ -1.39
SMG1-201ENST00000330588 FAM170AA1A519 330 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 POM121BA6NF01 834 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 HMGB1P1B2RPK0 211 aaPredicted RBP6.35□□□□□ -1.39
SMG1-201ENST00000330588 RAD51BO15315 384 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 NRDCO43847 1150 aa6.35□□□□□ -1.39
SMG1-201ENST00000330588 BUB1BO60566 1050 aaPredicted RBP6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms