RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 ISG20Q96AZ6 181 aaKnown RBP16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 MRGPRX2Q96LB1 330 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 CINPQ9BW66 212 aaPredicted RBP16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 CEP44Q9C0F1 390 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 MIR1-1HGQ9H1L0 117 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 SGK2Q9HBY8 427 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 CAPN10Q9HC96 672 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 SYBUQ9NX95 663 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 SCML1Q9UN30 329 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 NCKAP1Q9Y2A7 1128 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 RPS6KL1Q9Y6S9 549 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 ADAMTS9Q9P2N4 1935 aa16.47■□□□□ 0.23
PDLIM1-201ENST00000329399 LOC285095A0A1B0GVY8 99 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 KPNA3O00505 521 aaPredicted RBP16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 KHNYNO15037 678 aaKnown RBP16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 CFIP05156 583 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 SNRPAP09012 282 aaKnown RBP16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 MAPK8P45983 427 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 RGRP47804 291 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 PPP2CBP62714 309 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 PPP2CAP67775 309 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 ANKRD20A4Q4UJ75 823 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 PIP5KL1Q5T9C9 394 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 PDPK2PQ6A1A2 396 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 LAYNQ6UX15 382 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 PRPF39Q86UA1 669 aaKnown RBP16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 MPP5Q8N3R9 675 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 TMIEQ8NEW7 156 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 IPMKQ8NFU5 416 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 SPATA22Q8NHS9 363 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 ARRDC2Q8TBH0 407 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 FOXJ1Q92949 421 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 SGSM3Q96HU1 749 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 EXOC2Q96KP1 924 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 NKIRAS1Q9NYS0 192 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 LHX3Q9UBR4 397 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 IL36AQ9UHA7 158 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 RIMKLBQ9ULI2 386 aa16.46■□□□□ 0.23
PDLIM1-201ENST00000329399 HEATR9A2RTY3 570 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 MEI4A8MW99 385 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 MUSKO15146 869 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 MT-CYBP00156 380 aaPredicted RBP16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 C1QAP02745 245 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 FGF1P05230 155 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 BRAFP15056 766 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 HADHAP40939 763 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 GYS2P54840 703 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 SPARCL1Q14515 664 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 MYLK3Q32MK0 819 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 AASDHQ4L235 1098 aaPredicted RBP16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 KIAA0895LQ68EN5 471 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 DENND5AQ6IQ26 1287 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 SLC23A3Q6PIS1 610 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 CTAGE3PQ8IX95 158 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 LMNTD2Q8IXW0 634 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 SNX19Q92543 992 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 IFT43Q96FT9 208 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 CERS2Q96G23 380 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 NUDCD1Q96RS6 583 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 HEPHQ9BQS7 1158 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 FICDQ9BVA6 458 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 ZDHHC6Q9H6R6 413 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 DLL3Q9NYJ7 618 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 TBK1Q9UHD2 729 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 EVLQ9UI08 416 aaPredicted RBP16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 FZD4Q9ULV1 537 aa16.45■□□□□ 0.22
PDLIM1-201ENST00000329399 TTC24A2A3L6 582 aaPredicted RBP16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 PMPCBO75439 489 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 MT-ND3P03897 115 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 MMP2P08253 660 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 CD86P42081 329 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 CSNK1DP48730 415 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 CDK18Q07002 472 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 NIPAL4Q0D2K0 466 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 DUOXA1Q1HG43 343 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 SKIDA1Q1XH10 827 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 GRTP1Q5TC63 336 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 STPG1Q5TH74 334 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 FAM46CQ5VWP2 391 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 TIFABQ6ZNK6 161 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 DSG4Q86SJ6 1040 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 PPM1NQ8N819 430 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 OR2AP1Q8NGE2 309 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 OR2T34Q8NGX1 318 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 CPNE1Q99829 537 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 SEMA3CQ99985 751 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 TRABDQ9H4I3 376 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 CCDC134Q9H6E4 229 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 PLAC1Q9HBJ0 212 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 INTS9Q9NV88 658 aaKnown RBP16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 UBP1Q9NZI7 540 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 TXNDC16Q9P2K2 825 aa16.44■□□□□ 0.22
PDLIM1-201ENST00000329399 TBC1D3DA0A087WVF3 549 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 TBC1D3IA0A087WXS9 549 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 TBC1D3EA0A087X179 549 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 TBC1D3KA0A087X1G2 549 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 DCDC2BA2VCK2 349 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 TBC1D3FA6NER0 549 aaPredicted RBP16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 C4orf47A7E2U8 309 aa16.43■□□□□ 0.22
PDLIM1-201ENST00000329399 TBC1D3LB9A6J9 549 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms