RNA–Protein interactions for RNA: ENST00000327028.8

VIPAS39-201, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5 BASIC

Gene VIPAS39, Length 2,614 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-201ENST00000327028 SCG3Q8WXD2 468 aaKnown RBP10.22□□□□□ -0.77
VIPAS39-201ENST00000327028 ZBTB9Q96C00 473 aa10.22□□□□□ -0.77
VIPAS39-201ENST00000327028 SIPA1Q96FS4 1042 aa10.22□□□□□ -0.77
VIPAS39-201ENST00000327028 MRGPRX1Q96LB2 322 aa10.22□□□□□ -0.77
VIPAS39-201ENST00000327028 PLEKHG4BQ96PX9 1271 aa10.22□□□□□ -0.77
VIPAS39-201ENST00000327028 POLMQ9NP87 494 aaPredicted RBP10.22□□□□□ -0.77
VIPAS39-201ENST00000327028 MED4Q9NPJ6 270 aa10.22□□□□□ -0.77
VIPAS39-201ENST00000327028 TXNDC16Q9P2K2 825 aa10.22□□□□□ -0.77
VIPAS39-201ENST00000327028 APPL1Q9UKG1 709 aa10.22□□□□□ -0.77
VIPAS39-201ENST00000327028 PSAT1Q9Y617 370 aa10.22□□□□□ -0.77
VIPAS39-201ENST00000327028 COL6A3P12111 3177 aa10.22□□□□□ -0.77
VIPAS39-201ENST00000327028 A0A1W2PP55 124 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 GAPDHSO14556 408 aaPredicted RBP10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 CD3EAPO15446 510 aaKnown RBP10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 RGS16O15492 202 aaPredicted RBP10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 SYF2O95926 243 aaKnown RBP10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 NDUFV2P19404 249 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 LIG3P49916 1009 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 GAS6Q14393 721 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 TMED2Q15363 201 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 FASTKD1Q53R41 847 aaKnown RBP10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 GRTP1Q5TC63 336 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 AGBL2Q5U5Z8 902 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 MRNIPQ6NTE8 343 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 TRIM67Q6ZTA4 783 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 USP30Q70CQ3 517 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 STRA8Q7Z7C7 330 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 CILP2Q8IUL8 1156 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 OTUD6BQ8N6M0 293 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 CLDN23Q96B33 292 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 COQ10AQ96MF6 247 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 OMDQ99983 421 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 CDH19Q9H159 772 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 STMN4Q9H169 189 aaPredicted RBP10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 IL26Q9NPH9 171 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 FBXL12Q9NXK8 326 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 MARCH4Q9P2E8 410 aaPredicted RBP10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 FZD4Q9ULV1 537 aa10.21□□□□□ -0.77
VIPAS39-201ENST00000327028 GLYATL1P3A0A0U1RQE8 302 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 NEMP1O14524 444 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 TSPAN6O43657 245 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 FAM155BO75949 473 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 GABRG2P18507 467 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 CNTFP26441 200 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 TAS2R38P59533 333 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 CACNG1Q06432 222 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 TYSND1Q2T9J0 566 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 HSP90B2PQ58FF3 399 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 AARS2Q5JTZ9 985 aaKnown RBP10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 KIAA1324Q6UXG2 1013 aaKnown RBP10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 FAM151BQ6UXP7 276 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 TECPR1Q7Z6L1 1165 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 KBTBD6Q86V97 674 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 DENND6AQ8IWF6 608 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 NRSN1Q8IZ57 195 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 GPR26Q8NDV2 337 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 CXorf40AQ8TE69 158 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 RBBP8Q99708 897 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 MCMBPQ9BTE3 642 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 WRAP53Q9BUR4 548 aaKnown RBP10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 CHRDQ9H2X0 955 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 CENPHQ9H3R5 247 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 FBXO5Q9UKT4 447 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 SLC30A1Q9Y6M5 507 aa10.21□□□□□ -0.78
VIPAS39-201ENST00000327028 IQANK1A0A1B0GTG1 560 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 PLRG1O43660 514 aaKnown RBP10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 SRP72O76094 671 aaKnown RBP10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 PRAMEF1O95521 474 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 C6P13671 934 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 GM2AP17900 193 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 ITGALP20701 1170 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 RPS9P46781 194 aaKnown RBP10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 LIMK2P53671 638 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 MPP1Q00013 466 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 SEMA3AQ14563 771 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 TTMPQ5BVD1 217 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 TNFAIP8L3Q5GJ75 292 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 TJAP1Q5JTD0 557 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 ZNF765Q7L2R6 523 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 CYP2U1Q7Z449 544 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 SNX20Q7Z614 316 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 SDCCAG8Q86SQ7 713 aaPredicted RBP10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 DTX3LQ8TDB6 740 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 GANCQ8TET4 914 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 TBRG4Q969Z0 631 aaKnown RBP eCLIP10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 ARL8AQ96BM9 186 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 DTD2Q96FN9 168 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 NECAB3Q96P71 396 aaPredicted RBP10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 TBK1Q9UHD2 729 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 FNDC3AQ9Y2H6 1198 aaKnown RBP10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 KRT37O76014 449 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 KRT38O76015 456 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 ACADMP11310 421 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 ATP5DP30049 168 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 ETV3P41162 512 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 LEPRP48357 1165 aaKnown RBP10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 CD151P48509 253 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 CREB5Q02930 508 aa10.2□□□□□ -0.78
VIPAS39-201ENST00000327028 ILF2Q12905 390 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms