RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 GUCA1CO95843 209 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 SERPINF2P08697 491 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 PIK3CGP48736 1102 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 AGTR2P50052 363 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 INHBCP55103 352 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 PPP1R8Q12972 351 aaKnown RBP12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 DCTN2Q13561 401 aaKnown RBP12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 BHLHA9Q7RTU4 235 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 ATP6V0D2Q8N8Y2 350 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 OR7D4Q8NG98 312 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 HMGCLL1Q8TB92 370 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 PTCD2Q8WV60 388 aaKnown RBP12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 MS4A4AQ96JQ5 239 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 POLR1EQ9GZS1 481 aaKnown RBP12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 POLR1BQ9H9Y6 1135 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 MEAF6Q9HAF1 191 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 GIT1Q9Y2X7 761 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 CBX4O00257 560 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 CDC7O00311 574 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 SYNCRIPO60506 623 aaKnown RBP12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 RPL9P32969 192 aaKnown RBP12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 HUNKP57058 714 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 HERVK_113P63132 956 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 PURAQ00577 322 aaKnown RBP12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 TUSC3Q13454 348 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 RFTN1Q14699 578 aaPredicted RBP12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 OR4D1Q15615 310 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 XKR4Q5GH76 650 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 LDLRAD1Q5T700 205 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 FBXL22Q6P050 247 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 GLB1LQ6UWU2 654 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 CAMK1DQ8IU85 385 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 LGI2Q8N0V4 545 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 OR4L1Q8NH43 312 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 RIN3Q8TB24 985 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 HSPBAP1Q96EW2 488 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 PPP1R2P1Q96PQ5 205 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 GPR21Q99679 349 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 PTPN18Q99952 460 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 HGH1Q9BTY7 390 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 ADI1Q9BV57 179 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 ERVK-6Q9BXR3 956 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 CCDC90BQ9GZT6 254 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 ZNF696Q9H7X3 374 aa12.86□□□□□ -0.35
HMGCS1-201ENST00000325110 CCDC154A6NI56 674 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 GSTA4O15217 222 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 S1PR4O95977 384 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 OXTRP30559 389 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 DNAJB13P59910 316 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 CLCQ05315 142 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 RAD51Q06609 339 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 TAF12Q16514 161 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 TMEM214Q6NUQ4 689 aaKnown RBP12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 BNIPLQ7Z465 357 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 GLT6D1Q7Z4J2 308 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 ABI1Q8IZP0 508 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 IGSF8Q969P0 613 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 NCLNQ969V3 563 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 APOL5Q9BWW9 433 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 OSER1Q9NX31 292 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 TAS2R13Q9NYV9 303 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 TDRKHQ9Y2W6 561 aaKnown RBP12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 ANGPTL3Q9Y5C1 460 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 PAPPA2Q9BXP8 1791 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 MAGEB3O15480 346 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 CDH2P19022 906 aaPredicted RBP12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 STT3AP46977 705 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 LEPRP48357 1165 aaKnown RBP12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 PLA2G4EQ3MJ16 856 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 CTXN3Q4LDR2 81 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 CNTN4Q8IWV2 1026 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 SKA2Q8WVK7 121 aaPredicted RBP12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 EGFL8Q99944 293 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 SMOC2Q9H3U7 446 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 ZMYM5Q9UJ78 669 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 SLC7A4O43246 635 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 MGEA5O60502 916 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 CHRNA1P02708 482 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 NR4A1P22736 598 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 PRDX3P30048 256 aaKnown RBP12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 ADRA1AP35348 466 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 FOXD4Q12950 439 aaPredicted RBP12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 NR6A1Q15406 480 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 FUNDC1Q8IVP5 155 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 SLC15A3Q8IY34 581 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 DHRSXQ8N5I4 330 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 SENP6Q9GZR1 1112 aaPredicted RBP12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 ZNF385DQ9H6B1 395 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 SMOXQ9NWM0 555 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 TRMT6Q9UJA5 497 aaKnown RBP12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 USP22Q9UPT9 525 aa12.85□□□□□ -0.35
HMGCS1-201ENST00000325110 GOLGA4Q13439 2230 aaKnown RBP12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 KLHL33A6NCF5 533 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 ARPC2O15144 300 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 ZNF865P0CJ78 1059 aaPredicted RBP12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 GGT5P36269 586 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 LIPEQ05469 1076 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 TAF10Q12962 218 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 LPIN1Q14693 890 aa12.84□□□□□ -0.35
HMGCS1-201ENST00000325110 ADRM1Q16186 407 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms