RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 ECT2Q9H8V3 914 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 KLHL14Q9P2G3 628 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 MARCOQ9UEW3 520 aaPredicted RBP18.37■□□□□ 0.53
USP39-201ENST00000323701 RPL26L1Q9UNX3 145 aaKnown RBP18.37■□□□□ 0.53
USP39-201ENST00000323701 WASF2Q9Y6W5 498 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 CCT8L1PA6NM43 557 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 H7C0S8 307 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 DLDP09622 509 aaKnown RBP18.37■□□□□ 0.53
USP39-201ENST00000323701 CCDC166P0CW27 439 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 FDXRP22570 491 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 LIG3P49916 1009 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 SDCCAG8Q86SQ7 713 aaPredicted RBP18.37■□□□□ 0.53
USP39-201ENST00000323701 CNPY4Q8N129 248 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 GABPB2Q8TAK5 448 aaPredicted RBP18.37■□□□□ 0.53
USP39-201ENST00000323701 SGF29Q96ES7 293 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 SCYL1Q96KG9 808 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 TRPV4Q9HBA0 871 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 GTSE1Q9NYZ3 720 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 PKP3Q9Y446 797 aa18.37■□□□□ 0.53
USP39-201ENST00000323701 TBX10O75333 385 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 IL1BP01584 269 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 KITP10721 976 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 RALBP11234 206 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 COL6A2P12110 1019 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 BPIP17213 487 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 KCNC1P48547 511 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 KDSRQ06136 332 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 ATG16L1Q676U5 607 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 TRPM8Q7Z2W7 1104 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 TDHQ8IZJ6 230 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 ZNF557Q8N988 423 aaPredicted RBP18.36■□□□□ 0.53
USP39-201ENST00000323701 CHFRQ96EP1 664 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 C7orf26Q96N11 449 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 KLHL32Q96NJ5 620 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 TUBGCP5Q96RT8 1024 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 SORT1Q99523 831 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 AARSD1Q9BTE6 412 aaKnown RBP18.36■□□□□ 0.53
USP39-201ENST00000323701 RPP25Q9BUL9 199 aaKnown RBP18.36■□□□□ 0.53
USP39-201ENST00000323701 IL26Q9NPH9 171 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 CDH7Q9ULB5 785 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 TRIOO75962 3097 aa18.36■□□□□ 0.53
USP39-201ENST00000323701 NEMP2A6NFY4 417 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 LEFTY1O75610 366 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 CCR10P46092 362 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 POM121L1PQ3SYA9 428 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 SPATS2Q86XZ4 545 aaKnown RBP18.35■□□□□ 0.53
USP39-201ENST00000323701 SCRN2Q96FV2 425 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 SLC30A3Q99726 388 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 KXD1Q9BQD3 176 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 ZDHHC4Q9NPG8 344 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 A0A087X1B8 175 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 A0A0G2JND7 137 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 DLX3O60479 287 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 KCNA5P22460 613 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 SLC1A6P48664 564 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 ADAM15Q13444 863 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 ARSIQ5FYB1 569 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 LRRC66Q68CR7 880 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 FAM45BPQ6NSW5 357 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 TBC1D1Q86TI0 1168 aaPredicted RBP18.35■□□□□ 0.53
USP39-201ENST00000323701 TRIM42Q8IWZ5 723 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 PPP1R14CQ8TAE6 165 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 RAB3IL1Q8TBN0 382 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 FAM45AQ8TCE6 357 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 PPM1EQ8WY54 764 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 S1PR5Q9H228 398 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 BRD9Q9H8M2 597 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 INTS10Q9NVR2 710 aaKnown RBP18.35■□□□□ 0.53
USP39-201ENST00000323701 OXSMQ9NWU1 459 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 FAM50BQ9Y247 325 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 SLC27A6Q9Y2P4 619 aa18.35■□□□□ 0.53
USP39-201ENST00000323701 WASH3PC4AMC7 463 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 NDUFS3O75489 264 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 PRAMEF1O95521 474 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 NFATC1O95644 943 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 SERPINE1P05121 402 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 CHRM1P11229 460 aaPredicted RBP18.34■□□□□ 0.53
USP39-201ENST00000323701 UGT1A6P19224 532 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 UGT1A1P22309 533 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 UGT1A4P22310 534 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 UGT1A3P35503 534 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 UGT1A5P35504 534 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 METAP1P53582 386 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 PTSQ03393 145 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 CTSL3PQ5NE16 218 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 PARM1Q6UWI2 310 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 GDPD4Q6W3E5 623 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 ZYG11AQ6WRX3 759 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 TAS2R42Q7RTR8 314 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 GPR26Q8NDV2 337 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 FGF14Q92915 247 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 PPP2R3CQ969Q6 453 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 MCCC1Q96RQ3 725 aaPredicted RBP18.34■□□□□ 0.53
USP39-201ENST00000323701 LYSMD1Q96S90 227 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 ZFP14Q9HCL3 533 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 THAP1Q9NVV9 213 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 ELOVL2Q9NXB9 296 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 PPIL1Q9Y3C6 166 aa18.34■□□□□ 0.53
USP39-201ENST00000323701 KIF26AQ9ULI4 1882 aaPredicted RBP18.34■□□□□ 0.53
USP39-201ENST00000323701 MYL2P10916 166 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms