RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 BTG3Q14201 252 aaPredicted RBP12.16□□□□□ -0.46
SEC24A-201ENST00000322887 HERC3Q15034 1050 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 CYP51A1Q16850 503 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 DHRS4L2Q6PKH6 230 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 ITIH5Q86UX2 942 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 SLC15A3Q8IY34 581 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 ESAMQ96AP7 390 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 PBXIP1Q96AQ6 731 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 ITCHQ96J02 903 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 OSMRQ99650 979 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 HTATIP2Q9BUP3 242 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 MRPL46Q9H2W6 279 aaKnown RBP12.16□□□□□ -0.46
SEC24A-201ENST00000322887 PRDM8Q9NQV8 689 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 TBC1D23Q9NUY8 699 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 VTI1BQ9UEU0 232 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 BCAP29Q9UHQ4 241 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 A0A087WXM4 84 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 PRSS56P0CW18 603 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 TCF3P15923 654 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 FSHRP23945 695 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 ADRA1BP35368 520 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 MAXP61244 160 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 LSM3P62310 102 aaKnown RBP12.16□□□□□ -0.46
SEC24A-201ENST00000322887 PAFAH1B3Q15102 231 aaKnown RBP12.16□□□□□ -0.46
SEC24A-201ENST00000322887 PAQR9Q6ZVX9 377 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 RNF168Q8IYW5 571 aaPredicted RBP12.16□□□□□ -0.46
SEC24A-201ENST00000322887 SLC7A5P1Q8MH63 180 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 PSD4Q8NDX1 1056 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 TMEM40Q8WWA1 233 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 HBEGFQ99075 208 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 DGCR6LQ9BY27 220 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 CNOT11Q9UKZ1 510 aaKnown RBP12.16□□□□□ -0.46
SEC24A-201ENST00000322887 ATP11BQ9Y2G3 1177 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 TRAF6Q9Y4K3 522 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 KCTD3Q9Y597 815 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 TTC3P53804 2025 aa12.16□□□□□ -0.46
SEC24A-201ENST00000322887 FXYD1O00168 92 aa12.15□□□□□ -0.46
SEC24A-201ENST00000322887 INHBBP09529 407 aa12.15□□□□□ -0.46
SEC24A-201ENST00000322887 RCVRNP35243 200 aa12.15□□□□□ -0.46
SEC24A-201ENST00000322887 STX5Q13190 355 aa12.15□□□□□ -0.46
SEC24A-201ENST00000322887 IMPG1Q17R60 797 aa12.15□□□□□ -0.46
SEC24A-201ENST00000322887 SLC36A3Q495N2 470 aa12.15□□□□□ -0.46
SEC24A-201ENST00000322887 C9orf57Q5W0N0 161 aa12.15□□□□□ -0.46
SEC24A-201ENST00000322887 STRADAQ7RTN6 431 aa12.15□□□□□ -0.46
SEC24A-201ENST00000322887 DDIASQ8IXT1 998 aa12.15□□□□□ -0.46
SEC24A-201ENST00000322887 MUS81Q96NY9 551 aa12.15□□□□□ -0.46
SEC24A-201ENST00000322887 NPY6RQ99463 290 aa12.15□□□□□ -0.46
SEC24A-201ENST00000322887 MED10Q9BTT4 135 aa12.15□□□□□ -0.46
SEC24A-201ENST00000322887 WDR6Q9NNW5 1121 aaKnown RBP12.15□□□□□ -0.46
SEC24A-201ENST00000322887 TMEM39AQ9NV64 488 aa12.15□□□□□ -0.46
SEC24A-201ENST00000322887 TSR3Q9UJK0 312 aaKnown RBP12.15□□□□□ -0.46
SEC24A-201ENST00000322887 UTS2RQ9UKP6 389 aa12.15□□□□□ -0.46
SEC24A-201ENST00000322887 TIMM22Q9Y584 194 aa12.15□□□□□ -0.46
SEC24A-201ENST00000322887 KIAA0100Q14667 2235 aaKnown RBP12.15□□□□□ -0.46
SEC24A-201ENST00000322887 ARPC2O15144 300 aa12.15□□□□□ -0.47
SEC24A-201ENST00000322887 RSL1D1O76021 490 aaKnown RBP12.15□□□□□ -0.47
SEC24A-201ENST00000322887 RECQL4O94761 1208 aa12.15□□□□□ -0.47
SEC24A-201ENST00000322887 BAIAP3O94812 1187 aa12.15□□□□□ -0.47
SEC24A-201ENST00000322887 LRIG2O94898 1065 aa12.15□□□□□ -0.47
SEC24A-201ENST00000322887 CXCL10P02778 98 aa12.15□□□□□ -0.47
SEC24A-201ENST00000322887 HMOX2P30519 316 aa12.15□□□□□ -0.47
SEC24A-201ENST00000322887 HOXA11P31270 313 aaPredicted RBP12.15□□□□□ -0.47
SEC24A-201ENST00000322887 ARCN1P48444 511 aaKnown RBP12.15□□□□□ -0.47
SEC24A-201ENST00000322887 BCAP31P51572 246 aa12.15□□□□□ -0.47
SEC24A-201ENST00000322887 AFF1P51825 1210 aaKnown RBP12.15□□□□□ -0.47
SEC24A-201ENST00000322887 SH3BP2P78314 561 aa12.15□□□□□ -0.47
SEC24A-201ENST00000322887 SFSWAPQ12872 951 aaKnown RBP12.15□□□□□ -0.47
SEC24A-201ENST00000322887 SQLEQ14534 574 aa12.15□□□□□ -0.47
SEC24A-201ENST00000322887 ADRM1Q16186 407 aa12.15□□□□□ -0.47
SEC24A-201ENST00000322887 CYBRD1Q53TN4 286 aa12.15□□□□□ -0.47
SEC24A-201ENST00000322887 DCLRE1AQ6PJP8 1040 aa12.15□□□□□ -0.47
SEC24A-201ENST00000322887 RALGPS2Q86X27 583 aaPredicted RBP12.15□□□□□ -0.47
SEC24A-201ENST00000322887 ANKFN1Q8N957 763 aa12.15□□□□□ -0.47
SEC24A-201ENST00000322887 AGPAT4Q9NRZ5 378 aa12.15□□□□□ -0.47
SEC24A-201ENST00000322887 VPS51Q9UID3 782 aa12.15□□□□□ -0.47
SEC24A-201ENST00000322887 MEIS3P2A8K0S8 358 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 SYNCRIPO60506 623 aaKnown RBP12.14□□□□□ -0.47
SEC24A-201ENST00000322887 TIMP1P01033 207 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 BMP2P12643 396 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 CPB1P15086 417 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 MYF6P23409 242 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 MAP4P27816 1152 aaKnown RBP12.14□□□□□ -0.47
SEC24A-201ENST00000322887 IDUAP35475 653 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 EIF2B2P49770 351 aaKnown RBP12.14□□□□□ -0.47
SEC24A-201ENST00000322887 CDKN2DP55273 166 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 NFATC3Q12968 1075 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 LAPTM5Q13571 262 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 DNASE1L3Q13609 305 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 KYAT1Q16773 422 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 SAMD4BQ5PRF9 694 aaKnown RBP12.14□□□□□ -0.47
SEC24A-201ENST00000322887 DENND5AQ6IQ26 1287 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 ADGRG5Q8IZF4 528 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 DDHD1Q8NEL9 900 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 HM13Q8TCT9 377 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 LZICQ8WZA0 190 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 HEPHQ9BQS7 1158 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 C1orf50Q9BV19 199 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 TKTL2Q9H0I9 626 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 SNX25Q9H3E2 840 aa12.14□□□□□ -0.47
SEC24A-201ENST00000322887 GSTO2Q9H4Y5 243 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms