RNA–Protein interactions for RNA: ENST00000322535.10

SF3B2-201, Transcript of splicing factor 3b subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B2, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-201ENST00000322535 KIAA0319LQ8IZA0 1049 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 CBR4Q8N4T8 237 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 PCDH20Q8N6Y1 951 aaKnown RBP10.3□□□□□ -0.76
SF3B2-201ENST00000322535 OR6P1Q8NGX9 317 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 TMEM80Q96HE8 168 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 FAM167AQ96KS9 214 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 SNX18Q96RF0 628 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 WDR55Q9H6Y2 383 aaPredicted RBP10.3□□□□□ -0.76
SF3B2-201ENST00000322535 TNFRSF10DQ9UBN6 386 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 SNX7Q9UNH6 387 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 RAD51BO15315 384 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 SULT1B1O43704 296 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 CST3P01034 146 aaPredicted RBP10.3□□□□□ -0.76
SF3B2-201ENST00000322535 CD4P01730 458 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 KRT1P04264 644 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 SMIM10L2AP0DMW4 78 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 SMIM10L2BP0DMW5 78 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 CXCL8P10145 99 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 MTHFD1P11586 935 aaKnown RBP10.3□□□□□ -0.76
SF3B2-201ENST00000322535 ZNF3P17036 446 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 RBL1P28749 1068 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 TTKP33981 857 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 POLR2IP36954 125 aaKnown RBP10.3□□□□□ -0.76
SF3B2-201ENST00000322535 ST13P50502 369 aaKnown RBP10.3□□□□□ -0.76
SF3B2-201ENST00000322535 NUBP1P53384 320 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 TFAMQ00059 246 aaKnown RBP10.3□□□□□ -0.76
SF3B2-201ENST00000322535 CDC20Q12834 499 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 SLC10A2Q12908 348 aaPredicted RBP10.3□□□□□ -0.76
SF3B2-201ENST00000322535 NFX1Q12986 1120 aaKnown RBP10.3□□□□□ -0.76
SF3B2-201ENST00000322535 UBR7Q8N806 425 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 POC5Q8NA72 575 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 GALNT11Q8NCW6 608 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 LMO3Q8TAP4 145 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 FNIP1Q8TF40 1166 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 ELMO1Q92556 727 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 SLC47A1Q96FL8 570 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 CSF3RQ99062 836 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 DHRS4Q9BTZ2 278 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 WDR41Q9HAD4 459 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 ZC4H2Q9NQZ6 224 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 PARVAQ9NVD7 372 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP10.3□□□□□ -0.761e-7■■■□□ 14.8
SF3B2-201ENST00000322535 TMEM216Q9P0N5 145 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 MTRRQ9UBK8 725 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 ZNF175Q9Y473 711 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 EVPLLA8MZ36 301 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 LINC00587B1AMM8 73 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 GPR25O00155 361 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 BET1O15155 118 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 XYLBO75191 536 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 SNNO75324 88 aaPredicted RBP10.3□□□□□ -0.76
SF3B2-201ENST00000322535 TMEM63AO94886 807 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 SLITRK5O94991 958 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 AXLP30530 894 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 DPP6P42658 865 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 TM4SF4P48230 202 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 ORC1Q13415 861 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 ATAD3CQ5T2N8 411 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 TTC39BQ5VTQ0 682 aaPredicted RBP10.3□□□□□ -0.76
SF3B2-201ENST00000322535 C16orf89Q6UX73 402 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 MFSD7Q6UXD7 560 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 SCARA5Q6ZMJ2 495 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 PLEKHM3Q6ZWE6 761 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 SLC9A9Q8IVB4 645 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 TMEM40Q8WWA1 233 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 CPT1BQ92523 772 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 MOCOSQ96EN8 888 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 NPAS2Q99743 824 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 APBA2Q99767 749 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 RTKNQ9BST9 563 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 BBS2Q9BXC9 721 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 ANKRD60Q9BZ19 345 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 BCL2L14Q9BZR8 327 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 ST6GALNAC4Q9H4F1 302 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 ADGRE2Q9UHX3 823 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 ENPP5Q9UJA9 477 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 PSME2Q9UL46 239 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 SHOC2Q9UQ13 582 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 AURKCQ9UQB9 309 aa10.3□□□□□ -0.76
SF3B2-201ENST00000322535 UBE4BO95155 1302 aa10.29□□□□□ -0.76
SF3B2-201ENST00000322535 PRSS47A8MTI9 375 aa10.29□□□□□ -0.76
SF3B2-201ENST00000322535 E2F3O00716 465 aa10.29□□□□□ -0.76
SF3B2-201ENST00000322535 ADAM11O75078 769 aa10.29□□□□□ -0.76
SF3B2-201ENST00000322535 KRT19P08727 400 aa10.29□□□□□ -0.76
SF3B2-201ENST00000322535 HSMCR30P0CW71 290 aa10.29□□□□□ -0.76
SF3B2-201ENST00000322535 VEGFBP49765 207 aa10.29□□□□□ -0.76
SF3B2-201ENST00000322535 ATN1P54259 1190 aaPredicted RBP10.29□□□□□ -0.76
SF3B2-201ENST00000322535 OLR1P78380 273 aa10.29□□□□□ -0.76
SF3B2-201ENST00000322535 RAD51Q06609 339 aa10.29□□□□□ -0.76
SF3B2-201ENST00000322535 CACNB2Q08289 660 aaPredicted RBP10.29□□□□□ -0.76
SF3B2-201ENST00000322535 FSCN1Q16658 493 aaKnown RBP10.29□□□□□ -0.76
SF3B2-201ENST00000322535 C5orf22Q49AR2 442 aa10.29□□□□□ -0.76
SF3B2-201ENST00000322535 SLC9B1Q4ZJI4 515 aa10.29□□□□□ -0.76
SF3B2-201ENST00000322535 TDRD10Q5VZ19 366 aaKnown RBP10.29□□□□□ -0.76
SF3B2-201ENST00000322535 GTF2IRD2BQ6EKJ0 949 aa10.29□□□□□ -0.76
SF3B2-201ENST00000322535 ARSKQ6UWY0 536 aa10.29□□□□□ -0.76
SF3B2-201ENST00000322535 SH2D5Q6ZV89 423 aa10.29□□□□□ -0.76
SF3B2-201ENST00000322535 ZNF467Q7Z7K2 595 aaPredicted RBP10.29□□□□□ -0.76
SF3B2-201ENST00000322535 GTF2IRD2Q86UP8 949 aa10.29□□□□□ -0.76
SF3B2-201ENST00000322535 ARMC8Q8IUR7 673 aa10.29□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms