RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 CD68P34810 354 aaPredicted RBP10.99□□□□□ -0.65
TOP3A-201ENST00000321105 GDF5P43026 501 aa10.99□□□□□ -0.65
TOP3A-201ENST00000321105 PAOXQ6QHF9 649 aa10.99□□□□□ -0.65
TOP3A-201ENST00000321105 AFTPHQ6ULP2 937 aa10.99□□□□□ -0.65
TOP3A-201ENST00000321105 TMEM173Q86WV6 379 aaPredicted RBP10.99□□□□□ -0.65
TOP3A-201ENST00000321105 LRRC49Q8IUZ0 686 aa10.99□□□□□ -0.65
TOP3A-201ENST00000321105 CYB5D2Q8WUJ1 264 aa10.99□□□□□ -0.65
TOP3A-201ENST00000321105 OTULINQ96BN8 352 aa10.99□□□□□ -0.65
TOP3A-201ENST00000321105 CDKN2AIPNLQ96HQ2 116 aa10.99□□□□□ -0.65
TOP3A-201ENST00000321105 TSPAN18Q96SJ8 248 aa10.99□□□□□ -0.65
TOP3A-201ENST00000321105 OSBPL2Q9H1P3 480 aa10.99□□□□□ -0.65
TOP3A-201ENST00000321105 VTI1BQ9UEU0 232 aa10.99□□□□□ -0.65
TOP3A-201ENST00000321105 COL5A3P25940 1745 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-201ENST00000321105 PSMA4P25789 261 aaKnown RBP10.98□□□□□ -0.65
TOP3A-201ENST00000321105 TRAF2Q12933 501 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 CDC16Q13042 620 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 ZIK1Q3SY52 487 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-201ENST00000321105 SPDYE7PQ495Y7 208 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 SETMARQ53H47 684 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-201ENST00000321105 ADGRF1Q5T601 910 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 CACHD1Q5VU97 1274 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 USP45Q70EL2 814 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 RALGPS2Q86X27 583 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-201ENST00000321105 KREMEN2Q8NCW0 462 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 OLIG1Q8TAK6 271 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 ZNF398Q8TD17 642 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 NMD3Q96D46 503 aaKnown RBP10.98□□□□□ -0.65
TOP3A-201ENST00000321105 MYO19Q96H55 970 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 SLC2A13Q96QE2 648 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 POLR3BQ9NW08 1133 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-201ENST00000321105 H3BMM5 538 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 COCHO43405 550 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 NBNO60934 754 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 LBPP18428 481 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 ARHGDIAP52565 204 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 IRF8Q02556 426 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 LYSMD3Q7Z3D4 306 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 DHFR2Q86XF0 187 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 VPS33AQ96AX1 596 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 KCNA7Q96RP8 456 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 COPS8Q99627 209 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 CCT7Q99832 543 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 PCDHAC1Q9H158 963 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 MARCH4Q9P2E8 410 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-201ENST00000321105 THSD7AQ9UPZ6 1657 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 TCRBV5S1A1TA0A578 114 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 E7ESA3 106 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 GABRDO14764 452 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 INPPL1O15357 1258 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 RASSF9O75901 435 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 SNRPB2P08579 225 aaKnown RBP10.98□□□□□ -0.65
TOP3A-201ENST00000321105 VEGFBP49765 207 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 DPYSQ14117 519 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 FRG1Q14331 258 aaKnown RBP10.98□□□□□ -0.65
TOP3A-201ENST00000321105 PLA2G4EQ3MJ16 856 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 ZNF621Q6ZSS3 439 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 CHPFQ8IZ52 775 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 KCTD14Q9BQ13 255 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-201ENST00000321105 FAM126AQ9BYI3 521 aaPredicted RBP10.98□□□□□ -0.65
TOP3A-201ENST00000321105 ASPSCR1Q9BZE9 553 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 KLHL4Q9C0H6 718 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 NMRK1Q9NWW6 199 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 LIMD1Q9UGP4 676 aa10.98□□□□□ -0.65
TOP3A-201ENST00000321105 KNTC1P50748 2209 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 CAPN8A6NHC0 703 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 EVPLLA8MZ36 301 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 CDC7O00311 574 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 OR1I1O60431 355 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 RFPL2O75678 378 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 FYNP06241 537 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 ANPEPP15144 967 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 STK19P49842 368 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-201ENST00000321105 IL10RBQ08334 325 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 FAM124AQ86V42 546 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 CEP97Q8IW35 865 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 DSELQ8IZU8 1212 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 PRPF18Q99633 342 aaKnown RBP10.97□□□□□ -0.65
TOP3A-201ENST00000321105 ZNF184Q99676 751 aaPredicted RBP10.97□□□□□ -0.65
TOP3A-201ENST00000321105 TLE6Q9H808 572 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 NOL11Q9H8H0 719 aaKnown RBP10.97□□□□□ -0.65
TOP3A-201ENST00000321105 PRDM16Q9HAZ2 1276 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 STX18Q9P2W9 335 aaKnown RBP10.97□□□□□ -0.65
TOP3A-201ENST00000321105 GALPQ9UBC7 116 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 SCML2Q9UQR0 700 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 SSC5DA1L4H1 1573 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 TRBV23OR9-2A0A075B6M9 112 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 MAFKO60675 156 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 OR4F21O95013 312 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 IGFBP4P22692 258 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 GCAP28676 217 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 PCLAFQ15004 111 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 MSANTD2Q6P1R3 559 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 GCNT7Q6ZNI0 430 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 PHACTR4Q8IZ21 702 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 ZNF461Q8TAF7 563 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 BRSK1Q8TDC3 778 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 SH3RF2Q8TEC5 729 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 SLC25A23Q9BV35 468 aa10.97□□□□□ -0.65
TOP3A-201ENST00000321105 SPATS2LQ9NUQ6 558 aaKnown RBP10.97□□□□□ -0.65
TOP3A-201ENST00000321105 SLC7A8Q9UHI5 535 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms