RNA–Protein interactions for RNA: ENST00000320936.9

CIRBP-201, Transcript of cold inducible RNA binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIRBP, Length 1,328 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-201ENST00000320936 DOK6Q6PKX4 331 aa18.65■□□□□ 0.58
CIRBP-201ENST00000320936 GSTA5Q7RTV2 222 aa18.65■□□□□ 0.58
CIRBP-201ENST00000320936 CBARPQ8N350 705 aaPredicted RBP18.65■□□□□ 0.58
CIRBP-201ENST00000320936 OR56A4Q8NGH8 313 aa18.65■□□□□ 0.58
CIRBP-201ENST00000320936 GORASP1Q9BQQ3 440 aa18.65■□□□□ 0.58
CIRBP-201ENST00000320936 TCEAL2Q9H3H9 227 aaPredicted RBP18.65■□□□□ 0.58
CIRBP-201ENST00000320936 FAM83DQ9H4H8 585 aa18.65■□□□□ 0.58
CIRBP-201ENST00000320936 SPASTQ9UBP0 616 aa18.65■□□□□ 0.58
CIRBP-201ENST00000320936 NEMP2A6NFY4 417 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 INPP4BO15327 924 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 AQP9O43315 295 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 CBFA2T3O75081 653 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 PYGLP06737 847 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 STIP1P31948 543 aaKnown RBP18.64■□□□□ 0.57
CIRBP-201ENST00000320936 CDK3Q00526 305 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 OLIG2Q13516 323 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 SPARCL1Q14515 664 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 CDKN3Q16667 212 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 PARP6Q2NL67 630 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 DBX2Q6ZNG2 339 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 GLT6D1Q7Z4J2 308 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 PDXPQ96GD0 296 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 PBKQ96KB5 322 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 CNDP2Q96KP4 475 aaKnown RBP18.64■□□□□ 0.57
CIRBP-201ENST00000320936 TBL1YQ9BQ87 522 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 LGR4Q9BXB1 951 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 RAD18Q9NS91 495 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 HACD3Q9P035 362 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 DOLKQ9UPQ8 538 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 ZKSCAN5Q9Y2L8 839 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.64■□□□□ 0.57
CIRBP-201ENST00000320936 PCNX2A6NKB5 2137 aa18.64■□□□□ 0.57
CIRBP-201ENST00000320936 COL5A1P20908 1838 aaPredicted RBP18.64■□□□□ 0.57
CIRBP-201ENST00000320936 RGSL1A5PLK6 1076 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 TMEM202A6NGA9 273 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 USP12O75317 370 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 LDOC1O95751 146 aaPredicted RBP18.63■□□□□ 0.57
CIRBP-201ENST00000320936 TRIM23P36406 574 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 LMAN1P49257 510 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 HK3P52790 923 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 GNG11P61952 73 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 C1orf61Q13536 156 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 SIX1Q15475 284 aaPredicted RBP18.63■□□□□ 0.57
CIRBP-201ENST00000320936 CCNG2Q16589 344 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 ADAMTSL4Q6UY14 1074 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 KANSL1Q7Z3B3 1105 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 SLC25A45Q8N413 288 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 OR1E3Q8WZA6 343 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 MS4A14Q96JA4 679 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 NAP1L3Q99457 506 aaPredicted RBP18.63■□□□□ 0.57
CIRBP-201ENST00000320936 AGAP2Q99490 1192 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 LRRC61Q9BV99 259 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 SPATA16Q9BXB7 569 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 TEX101Q9BY14 249 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 TRABDQ9H4I3 376 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 CYP4F12Q9HCS2 524 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 FGF22Q9HCT0 170 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 BPIFA1Q9NP55 256 aa18.63■□□□□ 0.57
CIRBP-201ENST00000320936 MRPL40Q9NQ50 206 aaKnown RBP18.63■□□□□ 0.57
CIRBP-201ENST00000320936 PNMA8BQ9ULN7 279 aaPredicted RBP18.63■□□□□ 0.57
CIRBP-201ENST00000320936 E7EVH7 732 aa18.62■□□□□ 0.57
CIRBP-201ENST00000320936 AURKAO14965 403 aa18.62■□□□□ 0.57
CIRBP-201ENST00000320936 METTL18O95568 372 aa18.62■□□□□ 0.57
CIRBP-201ENST00000320936 TNFP01375 233 aa18.62■□□□□ 0.57
CIRBP-201ENST00000320936 HOXC4P09017 264 aaPredicted RBP18.62■□□□□ 0.57
CIRBP-201ENST00000320936 N4BP2L1Q5TBK1 243 aaPredicted RBP18.62■□□□□ 0.57
CIRBP-201ENST00000320936 NYAP1Q6ZVC0 841 aa18.62■□□□□ 0.57
CIRBP-201ENST00000320936 TRIM74Q86UV6 250 aa18.62■□□□□ 0.57
CIRBP-201ENST00000320936 RAVER1Q8IY67 606 aaKnown RBP18.62■□□□□ 0.57
CIRBP-201ENST00000320936 BAHD1Q8TBE0 780 aaPredicted RBP18.62■□□□□ 0.57
CIRBP-201ENST00000320936 RTP4Q96DX8 246 aa18.62■□□□□ 0.57
CIRBP-201ENST00000320936 HIC2Q96JB3 615 aa18.62■□□□□ 0.57
CIRBP-201ENST00000320936 OSBPL9Q96SU4 736 aa18.62■□□□□ 0.57
CIRBP-201ENST00000320936 LRRC40Q9H9A6 602 aa18.62■□□□□ 0.57
CIRBP-201ENST00000320936 HOMER3Q9NSC5 361 aa18.62■□□□□ 0.57
CIRBP-201ENST00000320936 PKP3Q9Y446 797 aa18.62■□□□□ 0.57
CIRBP-201ENST00000320936 MYLKQ15746 1914 aa18.62■□□□□ 0.57
CIRBP-201ENST00000320936 MED19A0JLT2 244 aaPredicted RBP18.61■□□□□ 0.57
CIRBP-201ENST00000320936 PRSS38A1L453 326 aa18.61■□□□□ 0.57
CIRBP-201ENST00000320936 PGRMC1O00264 195 aaKnown RBP18.61■□□□□ 0.57
CIRBP-201ENST00000320936 TNFSF14O43557 240 aa18.61■□□□□ 0.57
CIRBP-201ENST00000320936 SIGLEC6O43699 453 aa18.61■□□□□ 0.57
CIRBP-201ENST00000320936 ASMTLO95671 621 aa18.61■□□□□ 0.57
CIRBP-201ENST00000320936 SOD1P00441 154 aa18.61■□□□□ 0.57
CIRBP-201ENST00000320936 ANXA6P08133 673 aa18.61■□□□□ 0.57
CIRBP-201ENST00000320936 FTH1P19P0C7X4 201 aa18.61■□□□□ 0.57
CIRBP-201ENST00000320936 ETS1P14921 441 aa18.61■□□□□ 0.57
CIRBP-201ENST00000320936 TEAD1P28347 426 aa18.61■□□□□ 0.57
CIRBP-201ENST00000320936 ADRA1AP35348 466 aa18.61■□□□□ 0.57
CIRBP-201ENST00000320936 ELOCQ15369 112 aa18.61■□□□□ 0.57
CIRBP-201ENST00000320936 DEFB133Q30KQ1 61 aa18.61■□□□□ 0.57
CIRBP-201ENST00000320936 HENMT1Q5T8I9 393 aaKnown RBP18.61■□□□□ 0.57
CIRBP-201ENST00000320936 TMC3Q7Z5M5 1100 aa18.61■□□□□ 0.57
CIRBP-201ENST00000320936 PRUNE1Q86TP1 453 aa18.61■□□□□ 0.57
CIRBP-201ENST00000320936 PDCD7Q8N8D1 485 aaKnown RBP18.61■□□□□ 0.57
CIRBP-201ENST00000320936 OR4C6Q8NH72 309 aa18.61■□□□□ 0.57
CIRBP-201ENST00000320936 EID2BQ96D98 161 aa18.61■□□□□ 0.57
CIRBP-201ENST00000320936 CARS2Q9HA77 564 aaKnown RBP18.61■□□□□ 0.57
CIRBP-201ENST00000320936 NLGN3Q9NZ94 848 aa18.61■□□□□ 0.57
CIRBP-201ENST00000320936 SNX12Q9UMY4 172 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms