RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 HEPHQ9BQS7 1158 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 CCDC68Q9H2F9 335 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 NSUN3Q9H649 340 aaKnown RBP17.79■□□□□ 0.44
RAB39A-201ENST00000320578 TAS2R13Q9NYV9 303 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 SLC12A4Q9UP95 1085 aa17.79■□□□□ 0.44
RAB39A-201ENST00000320578 C1orf232A0A0U1RR37 186 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 TSPAN11A1L157 253 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 HEPACAM2A8MVW5 462 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 TK2O00142 265 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 CCDC166P0CW27 439 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 ATP5F1P24539 256 aaPredicted RBP17.78■□□□□ 0.44
RAB39A-201ENST00000320578 HK2P52789 917 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 PFKPQ01813 784 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 BNIP1Q12981 228 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 CSHL1Q14406 222 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 GDPD4Q6W3E5 623 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 ZSWIM9Q86XI8 627 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 PIANPQ8IYJ0 282 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 NAT16Q8N8M0 369 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 ABHD8Q96I13 439 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 SORT1Q99523 831 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 TTC1Q99614 292 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 OSBPL1AQ9BXW6 950 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 CPSF2Q9P2I0 782 aaKnown RBP17.78■□□□□ 0.44
RAB39A-201ENST00000320578 HAO1Q9UJM8 370 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 CHD9Q3L8U1 2897 aa17.78■□□□□ 0.44
RAB39A-201ENST00000320578 TRBV5-4A0A0C4DH59 114 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 ITM2AO43736 263 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 FSBPO95073 299 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 ESR1P03372 595 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 PYGLP06737 847 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 PKMP14618 531 aaKnown RBP17.77■□□□□ 0.44
RAB39A-201ENST00000320578 ALOX15P16050 662 aaPredicted RBP17.77■□□□□ 0.44
RAB39A-201ENST00000320578 NFKBIAP25963 317 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 BMP8BP34820 402 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 SKIV2L2P42285 1042 aaKnown RBP17.77■□□□□ 0.44
RAB39A-201ENST00000320578 GPR33Q49SQ1 333 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 ZRANB3Q5FWF4 1079 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 PSAPL1Q6NUJ1 521 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 SYCE2Q6PIF2 218 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 SNX20Q7Z614 316 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 ASIC4Q96FT7 647 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 BIRC8Q96P09 236 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 GATA5Q9BWX5 397 aaPredicted RBP17.77■□□□□ 0.44
RAB39A-201ENST00000320578 TMEM120AQ9BXJ8 343 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 DRC3Q9H069 523 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 BPIFA1Q9NP55 256 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 DCTN4Q9UJW0 460 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 CDH7Q9ULB5 785 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 PCDHB1Q9Y5F3 818 aa17.77■□□□□ 0.44
RAB39A-201ENST00000320578 OAS3Q9Y6K5 1087 aaKnown RBP17.77■□□□□ 0.44
RAB39A-201ENST00000320578 A0A0G2JND7 137 aa17.77■□□□□ 0.43
RAB39A-201ENST00000320578 DLX3O60479 287 aa17.77■□□□□ 0.43
RAB39A-201ENST00000320578 TULP3O75386 442 aa17.77■□□□□ 0.43
RAB39A-201ENST00000320578 SRP72O76094 671 aaKnown RBP17.77■□□□□ 0.43
RAB39A-201ENST00000320578 ZNF37AP17032 561 aaPredicted RBP17.77■□□□□ 0.43
RAB39A-201ENST00000320578 RPS3P23396 243 aaKnown RBP eCLIP17.77■□□□□ 0.43
RAB39A-201ENST00000320578 FCARP24071 287 aa17.77■□□□□ 0.43
RAB39A-201ENST00000320578 GLRBP48167 497 aa17.77■□□□□ 0.43
RAB39A-201ENST00000320578 ACTN3Q08043 901 aaPredicted RBP17.77■□□□□ 0.43
RAB39A-201ENST00000320578 HYAL1Q12794 435 aa17.77■□□□□ 0.43
RAB39A-201ENST00000320578 EIF4HQ15056 248 aaKnown RBP17.77■□□□□ 0.43
RAB39A-201ENST00000320578 CRTC1Q6UUV9 634 aa17.77■□□□□ 0.43
RAB39A-201ENST00000320578 TMEM207Q6UWW9 146 aa17.77■□□□□ 0.43
RAB39A-201ENST00000320578 Q6ZVU0 165 aa17.77■□□□□ 0.43
RAB39A-201ENST00000320578 PAF1Q8N7H5 531 aa17.77■□□□□ 0.43
RAB39A-201ENST00000320578 RHEBL1Q8TAI7 183 aa17.77■□□□□ 0.43
RAB39A-201ENST00000320578 ANKRD49Q8WVL7 239 aa17.77■□□□□ 0.43
RAB39A-201ENST00000320578 STON2Q8WXE9 905 aa17.77■□□□□ 0.43
RAB39A-201ENST00000320578 THOC1Q96FV9 657 aaKnown RBP17.77■□□□□ 0.43
RAB39A-201ENST00000320578 WWP1Q9H0M0 922 aa17.77■□□□□ 0.43
RAB39A-201ENST00000320578 ZDHHC6Q9H6R6 413 aa17.77■□□□□ 0.43
RAB39A-201ENST00000320578 DKK3Q9UBP4 350 aa17.77■□□□□ 0.43
RAB39A-201ENST00000320578 EPB41L3Q9Y2J2 1087 aaPredicted RBP17.77■□□□□ 0.43
RAB39A-201ENST00000320578 GOLGA8CPA6NN73 597 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 AGAP14A8MT82 685 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 F8W8V4 182 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 GAPDHSO14556 408 aaPredicted RBP17.76■□□□□ 0.43
RAB39A-201ENST00000320578 NPHS1O60500 1241 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 ATP5HO75947 161 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 UBOX5O94941 541 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 CLDN7O95471 211 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 SLC4A1P02730 911 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 ITGALP20701 1170 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 SPAM1P38567 509 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 SCTRP47872 440 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 PGGT1BP53609 377 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 FCHO2Q0JRZ9 810 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 PDAP1Q13442 181 aaKnown RBP17.76■□□□□ 0.43
RAB39A-201ENST00000320578 PTPRRQ15256 657 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 PTPRNQ16849 979 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 GAB4Q2WGN9 574 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 FAM91A1Q658Y4 838 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 TRIM68Q6AZZ1 485 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 SLC22A9Q8IVM8 553 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 PNPLA1Q8N8W4 532 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 DTX3LQ8TDB6 740 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 KCNJ9Q92806 393 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 P2RY12Q9H244 342 aa17.76■□□□□ 0.43
RAB39A-201ENST00000320578 TFB2MQ9H5Q4 396 aaKnown RBP17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms