RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 GPR174Q9BXC1 333 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 PHACTR1Q9C0D0 580 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 IL26Q9NPH9 171 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 ZFATQ9P243 1243 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 CTNNAL1Q9UBT7 734 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 TBK1Q9UHD2 729 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 ZFR2Q9UPR6 939 aaKnown RBP15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 PSAT1Q9Y617 370 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 FAM169AQ9Y6X4 670 aa15.36■□□□□ 0.05
PDLIM5-202ENST00000318007 EXOC1LA0A1B0GW35 172 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 SLC31A1O15431 190 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 RNGTTO60942 597 aaKnown RBP15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 GM2AP17900 193 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 SPINT3P49223 89 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 STC1P52823 247 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 MPP1Q00013 466 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 THOC5Q13769 683 aaKnown RBP15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 SEMA3AQ14563 771 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 PSAPL1Q6NUJ1 521 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 TAS2R42Q7RTR8 314 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 KBTBD6Q86V97 674 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 RELL1Q8IUW5 271 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 PTCD2Q8WV60 388 aaKnown RBP15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 CCDC97Q96F63 343 aaPredicted RBP15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 NAT9Q9BTE0 207 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 RIOK2Q9BVS4 552 aaKnown RBP15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 ZNF446Q9NWS9 450 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 PKD2L2Q9NZM6 624 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 RABGEF1Q9UJ41 708 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 SCN8AQ9UQD0 1980 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 A0A087WUV0 522 aaPredicted RBP15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 GLYATL1P3A0A0U1RQE8 302 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 TLDC2A0PJX2 215 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 K7ESF4 209 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 INPP4BO15327 924 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 MTX2O75431 263 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 PCCBP05166 539 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 ZNF30P17039 623 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 SPAM1P38567 509 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 ARCN1P48444 511 aaKnown RBP15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 CCR3P51677 355 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 PDE1BQ01064 536 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 ZBTB16Q05516 673 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 CHRNA6Q15825 494 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 STEAP4Q687X5 459 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 SPNS2Q8IVW8 549 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 RAB7BQ96AH8 199 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 ZIM3Q96PE6 472 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 CENPHQ9H3R5 247 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 C6orf106Q9H6K1 298 aaPredicted RBP15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 ASB8Q9H765 288 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 MRM3Q9HC36 420 aaKnown RBP15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 ITM2CQ9NQX7 267 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 USP36Q9P275 1121 aaKnown RBP15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 SCML1Q9UN30 329 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 CA5BQ9Y2D0 317 aa15.35■□□□□ 0.05
PDLIM5-202ENST00000318007 TRPM6Q9BX84 2022 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 FOXO6A8MYZ6 492 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 DYNC1I1O14576 645 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 WNT9AO14904 365 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 SASH3O75995 380 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 TM7SF2O76062 418 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 FSBPO95073 299 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 SEMA4FO95754 770 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 STX2P32856 288 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 HADHAP40939 763 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 SLC1A2P43004 574 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 SRSF5Q13243 272 aaKnown RBP15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 FGL2Q14314 439 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 ATP13A5Q4VNC0 1218 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 ZNF648Q5T619 568 aaPredicted RBP15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 NLRP9Q7RTR0 991 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 TRIM74Q86UV6 250 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 CCNJLQ8IV13 435 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 PIANPQ8IYJ0 282 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 OR4L1Q8NH43 312 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 FAM136AQ96C01 138 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 AP2M1Q96CW1 435 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 NUS1Q96E22 293 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 FBXO6Q9NRD1 293 aaPredicted RBP15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 FZD4Q9ULV1 537 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 SLC30A1Q9Y6M5 507 aa15.34■□□□□ 0.05
PDLIM5-202ENST00000318007 SPEGQ15772 3267 aa15.33■□□□□ 0.05
PDLIM5-202ENST00000318007 GAPDHSO14556 408 aaPredicted RBP15.33■□□□□ 0.05
PDLIM5-202ENST00000318007 LAMTOR5O43504 91 aa15.33■□□□□ 0.05
PDLIM5-202ENST00000318007 SRP72O76094 671 aaKnown RBP15.33■□□□□ 0.05
PDLIM5-202ENST00000318007 PGGT1BP53609 377 aa15.33■□□□□ 0.05
PDLIM5-202ENST00000318007 CSTF1Q05048 431 aaKnown RBP15.33■□□□□ 0.05
PDLIM5-202ENST00000318007 CCDC15Q0P6D6 951 aa15.33■□□□□ 0.05
PDLIM5-202ENST00000318007 ZNF789Q5FWF6 425 aa15.33■□□□□ 0.05
PDLIM5-202ENST00000318007 RAET1GQ6H3X3 334 aa15.33■□□□□ 0.05
PDLIM5-202ENST00000318007 KIAA0930Q6ICG6 404 aaPredicted RBP15.33■□□□□ 0.05
PDLIM5-202ENST00000318007 USP30Q70CQ3 517 aa15.33■□□□□ 0.05
PDLIM5-202ENST00000318007 PLA2G15Q8NCC3 412 aa15.33■□□□□ 0.05
PDLIM5-202ENST00000318007 GDAP1Q8TB36 358 aa15.33■□□□□ 0.05
PDLIM5-202ENST00000318007 FAM83DQ9H4H8 585 aa15.33■□□□□ 0.05
PDLIM5-202ENST00000318007 CATSPERZQ9NTU4 200 aa15.33■□□□□ 0.05
PDLIM5-202ENST00000318007 MOCS1Q9NZB8 636 aa15.33■□□□□ 0.05
PDLIM5-202ENST00000318007 SDK1Q7Z5N4 2213 aa15.33■□□□□ 0.04
PDLIM5-202ENST00000318007 CD3EAPO15446 510 aaKnown RBP15.33■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms