RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 MARCH4Q9P2E8 410 aaPredicted RBP19.07■□□□□ 0.64
RTN4-201ENST00000317610 ZNF639Q9UID6 485 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 DSEQ9UL01 958 aa19.07■□□□□ 0.64
RTN4-201ENST00000317610 MEIS3P2A8K0S8 358 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 PPP6CO00743 305 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 EI24O14681 340 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 BDNFP23560 247 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 TIAL1Q01085 375 aaKnown RBP eCLIP19.06■□□□□ 0.64
RTN4-201ENST00000317610 DHRSXQ8N5I4 330 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 NOL6Q9H6R4 1146 aaKnown RBP19.06■□□□□ 0.64
RTN4-201ENST00000317610 RGS18Q9NS28 235 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 POLG2Q9UHN1 485 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 ZFC3H1O60293 1989 aaKnown RBP19.06■□□□□ 0.64
RTN4-201ENST00000317610 E9PAM4 449 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 SEC24DO94855 1032 aaPredicted RBP19.06■□□□□ 0.64
RTN4-201ENST00000317610 MMP2P08253 660 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 INHBBP09529 407 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 UMPSP11172 480 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 MTHFD2P13995 350 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 IDO1P14902 403 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 HOXB8P17481 243 aaPredicted RBP19.06■□□□□ 0.64
RTN4-201ENST00000317610 CHRM3P20309 590 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 ZNF829Q3KNS6 432 aaPredicted RBP19.06■□□□□ 0.64
RTN4-201ENST00000317610 OGFOD2Q6N063 350 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 RAB44Q7Z6P3 723 aaPredicted RBP19.06■□□□□ 0.64
RTN4-201ENST00000317610 OR52K2Q8NGK3 314 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 RHEBL1Q8TAI7 183 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 TBC1D15Q8TC07 691 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 BORCS5Q969J3 196 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 CDCA5Q96FF9 252 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 TINF2Q9BSI4 451 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 INTS10Q9NVR2 710 aaKnown RBP19.06■□□□□ 0.64
RTN4-201ENST00000317610 TMEM9Q9P0T7 183 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 GPR45Q9Y5Y3 372 aa19.06■□□□□ 0.64
RTN4-201ENST00000317610 PTPRDP23468 1912 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 TMX2-CTNND1H3BSU7 103 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 GIPC1O14908 333 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 DYNC1LI2O43237 492 aaPredicted RBP19.05■□□□□ 0.64
RTN4-201ENST00000317610 VPS4BO75351 444 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 SIX3O95343 332 aaPredicted RBP19.05■□□□□ 0.64
RTN4-201ENST00000317610 GSK3BP49841 420 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 SLC5A3P53794 718 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 GRSF1Q12849 480 aaKnown RBP eCLIP19.05■□□□□ 0.64
RTN4-201ENST00000317610 FSCN1Q16658 493 aaKnown RBP19.05■□□□□ 0.64
RTN4-201ENST00000317610 CYP51A1Q16850 503 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 ZNF549Q6P9A3 640 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 DDIASQ8IXT1 998 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 TBC1D21Q8IYX1 336 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 OR6P1Q8NGX9 317 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 SNRNP27Q8WVK2 155 aaKnown RBP19.05■□□□□ 0.64
RTN4-201ENST00000317610 TUBA1CQ9BQE3 449 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 POPDC3Q9HBV1 291 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 ABCC13Q9NSE7 274 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 OAS3Q9Y6K5 1087 aaKnown RBP19.05■□□□□ 0.64
RTN4-201ENST00000317610 A0A1W2PP18 115 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 KANSL1LA0AUZ9 987 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 HAS3O00219 553 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 CBFA2T3O75081 653 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 CLIC3O95833 236 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 PRR35P0CG20 571 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 CD86P42081 329 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 RPS9P46781 194 aaKnown RBP19.05■□□□□ 0.64
RTN4-201ENST00000317610 RENBPP51606 427 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 ADARB1P78563 741 aaKnown RBP19.05■□□□□ 0.64
RTN4-201ENST00000317610 ACVR1Q04771 509 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 GRIK2Q13002 908 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 IHHQ14623 411 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 OR4D1Q15615 310 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 GPR107Q5VW38 600 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 C14orf80Q86SX3 495 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 DPP9Q86TI2 863 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 TADA1Q96BN2 335 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 VPS50Q96JG6 964 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 ATOH8Q96SQ7 321 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 PKMYT1Q99640 499 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 ACBD6Q9BR61 282 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 ALG2Q9H553 416 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 POLR1BQ9H9Y6 1135 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 TBC1D23Q9NUY8 699 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 MPP6Q9NZW5 540 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 HS3ST4Q9Y661 456 aa19.05■□□□□ 0.64
RTN4-201ENST00000317610 C9JVG2 144 aa19.04■□□□□ 0.64
RTN4-201ENST00000317610 THP07101 528 aa19.04■□□□□ 0.64
RTN4-201ENST00000317610 HGFP14210 728 aa19.04■□□□□ 0.64
RTN4-201ENST00000317610 HLCSP50747 726 aa19.04■□□□□ 0.64
RTN4-201ENST00000317610 AFF1P51825 1210 aaKnown RBP19.04■□□□□ 0.64
RTN4-201ENST00000317610 GRB14Q14449 540 aa19.04■□□□□ 0.64
RTN4-201ENST00000317610 ANKDD1AQ495B1 522 aa19.04■□□□□ 0.64
RTN4-201ENST00000317610 TIGD5Q53EQ6 642 aa19.04■□□□□ 0.64
RTN4-201ENST00000317610 AARS2Q5JTZ9 985 aaKnown RBP19.04■□□□□ 0.64
RTN4-201ENST00000317610 SCAMP5Q8TAC9 235 aa19.04■□□□□ 0.64
RTN4-201ENST00000317610 PNPT1Q8TCS8 783 aaKnown RBP19.04■□□□□ 0.64
RTN4-201ENST00000317610 CASP10Q92851 521 aa19.04■□□□□ 0.64
RTN4-201ENST00000317610 TUBGCP3Q96CW5 907 aa19.04■□□□□ 0.64
RTN4-201ENST00000317610 THAP11Q96EK4 314 aa19.04■□□□□ 0.64
RTN4-201ENST00000317610 NT5MQ9NPB1 228 aa19.04■□□□□ 0.64
RTN4-201ENST00000317610 MIOSQ9NXC5 875 aa19.04■□□□□ 0.64
RTN4-201ENST00000317610 ANAPC2Q9UJX6 822 aa19.04■□□□□ 0.64
RTN4-201ENST00000317610 ASPDHA6ND91 283 aa19.03■□□□□ 0.64
RTN4-201ENST00000317610 LRRC14BA6NHZ5 514 aa19.03■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms