RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 BRD8Q9H0E9 1235 aa17.7■□□□□ 0.42
TPM1-203ENST00000317516 DDX56Q9NY93 547 aaKnown RBP17.7■□□□□ 0.42
TPM1-203ENST00000317516 CD84Q9UIB8 345 aa17.7■□□□□ 0.42
TPM1-203ENST00000317516 A0A1W2PQM1 296 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 D6RAR5 112 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 KCNK1O00180 336 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 PPP1R12AO14974 1030 aaPredicted RBP17.69■□□□□ 0.42
TPM1-203ENST00000317516 TNFSF15O95150 251 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 PRLP01236 227 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 STC1P52823 247 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 IFI35P80217 286 aaPredicted RBP17.69■□□□□ 0.42
TPM1-203ENST00000317516 NIPAL4Q0D2K0 466 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 AP1B1Q10567 949 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 SLC9A4Q6AI14 798 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 BZW1Q7L1Q6 419 aaKnown RBP17.69■□□□□ 0.42
TPM1-203ENST00000317516 GPR155Q7Z3F1 870 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 RHOT1Q8IXI2 618 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 FBXO39Q8N4B4 442 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 LPCAT1Q8NF37 534 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 ZDHHC1Q8WTX9 485 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 SCAMP4Q969E2 229 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 FCRL3Q96P31 734 aaPredicted RBP17.69■□□□□ 0.42
TPM1-203ENST00000317516 LYSMD1Q96S90 227 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 MLPHQ9BV36 600 aaPredicted RBP17.69■□□□□ 0.42
TPM1-203ENST00000317516 CDH19Q9H159 772 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 EPB41L5Q9HCM4 733 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 SPATS2LQ9NUQ6 558 aaKnown RBP17.69■□□□□ 0.42
TPM1-203ENST00000317516 TAAR2Q9P1P5 351 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 RNF215Q9Y6U7 377 aa17.69■□□□□ 0.42
TPM1-203ENST00000317516 MYLKQ15746 1914 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 RGSL1A5PLK6 1076 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 RHPN2P1A8MT19 583 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 ANKRD66B4E2M5 251 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 PLD2O14939 933 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 KLK10O43240 276 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 FUCA1P04066 466 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 KRT1P04264 644 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 FGF1P05230 155 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 ITGA2BP08514 1039 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 HOXB3P14651 431 aaPredicted RBP17.68■□□□□ 0.42
TPM1-203ENST00000317516 CCKBRP32239 447 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 ADCY8P40145 1251 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 CD86P42081 329 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 ITPR1Q14643 2758 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 TCEAL1Q15170 157 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 DOK6Q6PKX4 331 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 RAB11FIP2Q7L804 512 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 PLD5Q8N7P1 536 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 LRRN4Q8WUT4 740 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 TMEM159Q96B96 161 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 SCARF2Q96GP6 870 aaPredicted RBP17.68■□□□□ 0.42
TPM1-203ENST00000317516 PRR11Q96HE9 360 aaPredicted RBP17.68■□□□□ 0.42
TPM1-203ENST00000317516 CELSR3Q9NYQ7 3312 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 LAMA5O15230 3695 aa17.68■□□□□ 0.42
TPM1-203ENST00000317516 A0A0U1RQS6 177 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 C1orf232A0A0U1RR37 186 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 A0A1W2PNU3 283 aaPredicted RBP17.67■□□□□ 0.42
TPM1-203ENST00000317516 C3orf70A6NLC5 250 aaPredicted RBP17.67■□□□□ 0.42
TPM1-203ENST00000317516 CDRT15L2A8MXV6 281 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 CASC3O15234 703 aaKnown RBP17.67■□□□□ 0.42
TPM1-203ENST00000317516 SPOPO43791 374 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 CLDN7O95471 211 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 POLD2P49005 469 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 PDX1P52945 283 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 TMPRSS3P57727 454 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 CTBSQ01459 385 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 IHHQ14623 411 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 SLC30A9Q6PML9 568 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 RFLNAQ6ZTI6 216 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 SPRED1Q7Z699 444 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 C17orf82Q86X59 251 aaPredicted RBP17.67■□□□□ 0.42
TPM1-203ENST00000317516 NRROSQ86YC3 692 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 RFX6Q8HWS3 928 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 RNF25Q96BH1 459 aaPredicted RBP17.67■□□□□ 0.42
TPM1-203ENST00000317516 SMIM14Q96QK8 99 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 OR2M4Q96R27 311 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 RIOK2Q9BVS4 552 aaKnown RBP17.67■□□□□ 0.42
TPM1-203ENST00000317516 FOXP3Q9BZS1 431 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 TRIM5Q9C035 493 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 PKD2L2Q9NZM6 624 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 AKAP7Q9P0M2 348 aaPredicted RBP17.67■□□□□ 0.42
TPM1-203ENST00000317516 TMEM98Q9Y2Y6 226 aa17.67■□□□□ 0.42
TPM1-203ENST00000317516 TEX51A0A1B0GUA7 166 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 ASMTLO95671 621 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 SOD1P00441 154 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 JMJD7P0C870 316 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 TNNT1P13805 278 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 AK4P27144 223 aaPredicted RBP17.66■□□□□ 0.42
TPM1-203ENST00000317516 NOP2P46087 812 aaKnown RBP17.66■□□□□ 0.42
TPM1-203ENST00000317516 NR2C2P49116 596 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 CXADRP78310 365 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 SKOR1P84550 965 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 TBX2Q13207 712 aaPredicted RBP17.66■□□□□ 0.42
TPM1-203ENST00000317516 LRP8Q14114 963 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 TFDP2Q14188 446 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 CLPPQ16740 277 aaPredicted RBP17.66■□□□□ 0.42
TPM1-203ENST00000317516 QPCTQ16769 361 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 CCDC70Q6NSX1 233 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 B3GNT8Q7Z7M8 397 aa17.66■□□□□ 0.42
TPM1-203ENST00000317516 CLEC14AQ86T13 490 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms