RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 FUBP3Q96I24 572 aaKnown RBP eCLIP17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 FCRL2Q96LA5 508 aaPredicted RBP17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 C8orf48Q96LL4 319 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 COG8Q96MW5 612 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 SELENONQ9NZV5 590 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 CD300AQ9UGN4 299 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 CDH7Q9ULB5 785 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 COQ6Q9Y2Z9 468 aa17.18■□□□□ 0.34
SCAMP4-201ENST00000316097 TRIM64CA6NLI5 447 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 MRASO14807 208 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 HOXA2O43364 376 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 TBC1D4O60343 1298 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 COL6A2P12110 1019 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 UGT1A6P19224 532 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 C21orf59P57076 290 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 PAFAH1B3Q15102 231 aaKnown RBP17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 PPP1R3AQ16821 1122 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 OGFOD2Q6N063 350 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 ZBTB46Q86UZ6 589 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 MON1AQ86VX9 555 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 TNIP2Q8NFZ5 429 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 FBXO32Q969P5 355 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 DUS3LQ96G46 650 aaKnown RBP17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 NPLQ9BXD5 320 aaPredicted RBP17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 RHOJQ9H4E5 214 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 AURKCQ9UQB9 309 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 SCML2Q9UQR0 700 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 NUP205Q92621 2012 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 FAM149AA5PLN7 773 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 OR6C75A6NL08 312 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 ZBTB24O43167 697 aaPredicted RBP17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 SRP72O76094 671 aaKnown RBP17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 ZBTB11O95625 1053 aaPredicted RBP17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 OCM2P0CE71 109 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 OCMP0CE72 109 aaPredicted RBP17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 CD247P20963 164 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 CSRP3P50461 194 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 SLC7A2P52569 658 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 PMS2P3Q13401 168 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 ZNF829Q3KNS6 432 aaPredicted RBP17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 FGD3Q5JSP0 725 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 ERMP1Q7Z2K6 904 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 SCML4Q8N228 414 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 DDHD1Q8NEL9 900 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 TBC1D15Q8TC07 691 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 SPPL2BQ8TCT7 592 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 PLEKHA8Q96JA3 519 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 ADI1Q9BV57 179 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 UBP1Q9NZI7 540 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 CROTQ9UKG9 612 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 SARDHQ9UL12 918 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 ACOT9Q9Y305 439 aa17.17■□□□□ 0.34
SCAMP4-201ENST00000316097 FUOMA2VDF0 154 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 NEMP2A6NFY4 417 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 DLGAP1O14490 977 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 UBDO15205 165 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 TPST1O60507 370 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 ZNF189O75820 626 aaPredicted RBP17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 CLIC3O95833 236 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 BMP2P12643 396 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 ATF6P18850 670 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 ATP6V1B2P21281 511 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 YWHAQP27348 245 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 CCR1P32246 355 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 FRG1Q14331 258 aaKnown RBP17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 SQLEQ14534 574 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 AARS2Q5JTZ9 985 aaKnown RBP17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 SAMD4BQ5PRF9 694 aaKnown RBP17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 C1QTNF12Q5T7M4 302 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 KIAA1841Q6NSI8 718 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 DCDC5Q6ZRR9 648 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 TMEM26Q6ZUK4 368 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 OTOP2Q7RTS6 562 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 TXNDC5Q8NBS9 432 aaKnown RBP17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 OR9I1Q8NGQ6 314 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 SMOC2Q9H3U7 446 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 POMKQ9H5K3 350 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 NCKIPSDQ9NZQ3 722 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 PTBP2Q9UKA9 531 aaKnown RBP17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 ZNF232Q9UNY5 417 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 WDR37Q9Y2I8 494 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 SERPINB7O75635 380 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 SNRPB2P08579 225 aaKnown RBP17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 UGT1A1P22309 533 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 UGT1A4P22310 534 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 MYF6P23409 242 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 DNAJB2P25686 324 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 UGT1A3P35503 534 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 UGT1A5P35504 534 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 HADHAP40939 763 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 NME5P56597 212 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 MAP7D1Q3KQU3 841 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 PDCD4Q53EL6 469 aaKnown RBP17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 CNKSR3Q6P9H4 555 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 ZNF513Q8N8E2 541 aaPredicted RBP17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 OR2T34Q8NGX1 318 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 OR2T3Q8NH03 318 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 IGSF21Q96ID5 467 aa17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 MLPHQ9BV36 600 aaPredicted RBP17.16■□□□□ 0.34
SCAMP4-201ENST00000316097 NAA50Q9GZZ1 169 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms