RNA–Protein interactions for RNA: ENST00000314759.5

SKA3-202, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SKA3, Length 2,919 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-202ENST00000314759 CDC42EP1Q00587 391 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 NR1D2Q14995 579 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 PCBP1Q15365 356 aaKnown RBP eCLIP13.43□□□□□ -0.26
SKA3-202ENST00000314759 PRMT9Q6P2P2 845 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 ABRAXAS1Q6UWZ7 409 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 PHYKPLQ8IUZ5 450 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 MIER2Q8N344 545 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 OR13J1Q8NGT2 312 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 CALML6Q8TD86 181 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 DNAJB3Q8WWF6 145 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 ACDQ96AP0 544 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 LRRC58Q96CX6 371 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 HEPHQ9BQS7 1158 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 ERVK-6Q9BXR3 956 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 ZNF236Q9UL36 1845 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 LTBP3Q9NS15 1303 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 PIP5K1BO14986 540 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 SIX3O95343 332 aaPredicted RBP13.43□□□□□ -0.26
SKA3-202ENST00000314759 MTHFD1P11586 935 aaKnown RBP13.43□□□□□ -0.26
SKA3-202ENST00000314759 GFAPP14136 432 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 MATN1P21941 496 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 MLLT10P55197 1068 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 ITGADQ13349 1161 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 CYP51A1Q16850 503 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 CYBRD1Q53TN4 286 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 GOLM1Q8NBJ4 401 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 OR52K2Q8NGK3 314 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 EXT2Q93063 718 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 TSPAN18Q96SJ8 248 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 CD320Q9NPF0 282 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 POLR3BQ9NW08 1133 aaPredicted RBP13.43□□□□□ -0.26
SKA3-202ENST00000314759 KCNH4Q9UQ05 1017 aa13.43□□□□□ -0.26
SKA3-202ENST00000314759 LRRC14BA6NHZ5 514 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 INPP4BO15327 924 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 IREB2P48200 963 aaKnown RBP13.42□□□□□ -0.26
SKA3-202ENST00000314759 APLP1P51693 650 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 MOGQ16653 247 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 TMTC4Q5T4D3 741 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 ARTNQ5T4W7 220 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 DDIASQ8IXT1 998 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 TWIST2Q8WVJ9 160 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 TSPYL2Q9H2G4 693 aaPredicted RBP13.42□□□□□ -0.26
SKA3-202ENST00000314759 TUBB1Q9H4B7 451 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 SLC52A3Q9NQ40 469 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 PCDHA9Q9Y5H5 950 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 B4GAT1O43505 415 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 SMIM10L2AP0DMW4 78 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 SMIM10L2BP0DMW5 78 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 C7P10643 843 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 TTKP33981 857 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 CAPGP40121 348 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 KPNA1P52294 538 aaPredicted RBP13.42□□□□□ -0.26
SKA3-202ENST00000314759 PLCL1Q15111 1095 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 KDELC1Q6UW63 502 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 DHRSXQ8N5I4 330 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 OR6J1Q8NGC5 347 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 KCNA7Q96RP8 456 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 SEZ6LQ9BYH1 1024 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 MID1IP1Q9NPA3 183 aa13.42□□□□□ -0.26
SKA3-202ENST00000314759 C1orf232A0A0U1RR37 186 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 SMIM35A0A1B0GVV1 85 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 TRIM64BA6NI03 449 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 PAGE1O75459 146 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 KCNH1O95259 989 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 S1PR4O95977 384 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 FGF4P08620 206 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 ZNF24P17028 368 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 BDNFP23560 247 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 RFC2P35250 354 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 SOX11P35716 441 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 LHX1P48742 406 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 EIF2B2P49770 351 aaKnown RBP13.41□□□□□ -0.26
SKA3-202ENST00000314759 ARSDP51689 593 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 NFKB2Q00653 900 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 NFATC3Q12968 1075 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 GEN1Q17RS7 908 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 RABL3Q5HYI8 236 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 GALNT18Q6P9A2 607 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 IFNEQ86WN2 208 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 ANKRD13AQ8IZ07 590 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 MAGEE2Q8TD90 523 aaPredicted RBP13.41□□□□□ -0.26
SKA3-202ENST00000314759 SLC16A10Q8TF71 515 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 TBRG4Q969Z0 631 aaKnown RBP eCLIP13.41□□□□□ -0.26
SKA3-202ENST00000314759 NSUN5Q96P11 429 aaKnown RBP13.41□□□□□ -0.26
SKA3-202ENST00000314759 ARNT2Q9HBZ2 717 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 SDR39U1Q9NRG7 319 aaPredicted RBP13.41□□□□□ -0.26
SKA3-202ENST00000314759 SMPD3Q9NY59 655 aaPredicted RBP13.41□□□□□ -0.26
SKA3-202ENST00000314759 KIAA1522Q9P206 1035 aaPredicted RBP13.41□□□□□ -0.26
SKA3-202ENST00000314759 MARCH4Q9P2E8 410 aaPredicted RBP13.41□□□□□ -0.26
SKA3-202ENST00000314759 CRYL1Q9Y2S2 319 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 TCRBV5S2A0A599 114 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 OR51F1A6NGY5 319 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 MEIS3P2A8K0S8 358 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 SNAP29O95721 258 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 GPIP06744 558 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 MYL3P08590 195 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 GSTT2P0CG29 244 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 GSTT2BP0CG30 244 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 NCK1P16333 377 aa13.41□□□□□ -0.26
SKA3-202ENST00000314759 KCNC4Q03721 635 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms