RNA–Protein interactions for RNA: ENST00000312990.10

CDK4-202, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best) BASIC

Gene CDK4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-202ENST00000312990 TSSK4Q6SA08 328 aa18.66■□□□□ 0.58
CDK4-202ENST00000312990 BMP8AQ7Z5Y6 402 aa18.66■□□□□ 0.58
CDK4-202ENST00000312990 KCNMB4Q86W47 210 aa18.66■□□□□ 0.58
CDK4-202ENST00000312990 FAM160A2Q8N612 972 aaPredicted RBP18.66■□□□□ 0.58
CDK4-202ENST00000312990 DTD2Q96FN9 168 aa18.66■□□□□ 0.58
CDK4-202ENST00000312990 SMYD2Q9NRG4 433 aa18.66■□□□□ 0.58
CDK4-202ENST00000312990 C20orf96Q9NUD7 363 aaPredicted RBP18.66■□□□□ 0.58
CDK4-202ENST00000312990 RABGEF1Q9UJ41 708 aa18.66■□□□□ 0.58
CDK4-202ENST00000312990 KNL1Q8NG31 2342 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 TBC1D3DA0A087WVF3 549 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 TBC1D3IA0A087WXS9 549 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 TBC1D3EA0A087X179 549 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 TBC1D3KA0A087X1G2 549 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 IGHV1OR15-9A0A0B4J2B8 117 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 TBC1D3FA6NER0 549 aaPredicted RBP18.65■□□□□ 0.58
CDK4-202ENST00000312990 FAM47DPA6NHR8 397 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 TBC1D3LB9A6J9 549 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 GPR39O43194 453 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 RNGTTO60942 597 aaKnown RBP18.65■□□□□ 0.58
CDK4-202ENST00000312990 RECQL5O94762 991 aaPredicted RBP18.65■□□□□ 0.58
CDK4-202ENST00000312990 GOT2P00505 430 aaKnown RBP18.65■□□□□ 0.58
CDK4-202ENST00000312990 TBC1D3HP0C7X1 549 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 PHBP35232 272 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 SPAM1P38567 509 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 DCDC1P59894 354 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 FGL2Q14314 439 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 EFTUD2Q15029 972 aaKnown RBP eCLIP18.65■□□□□ 0.589e-7■■■■■ 40
CDK4-202ENST00000312990 MAP7D1Q3KQU3 841 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 ALS2CLQ60I27 953 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 PDPK2PQ6A1A2 396 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 TBC1D3GQ6DHY5 549 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 TBC1D3CQ6IPX1 549 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 KIAA1161Q6NSJ0 714 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 FAM151BQ6UXP7 276 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 CYS1Q717R9 158 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 CYP2U1Q7Z449 544 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 RAVER1Q8IY67 606 aaKnown RBP18.65■□□□□ 0.58
CDK4-202ENST00000312990 MAML2Q8IZL2 1156 aaPredicted RBP18.65■□□□□ 0.58
CDK4-202ENST00000312990 TBC1D3Q8IZP1 549 aaPredicted RBP18.65■□□□□ 0.58
CDK4-202ENST00000312990 FBXL6Q8N531 539 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 OR6P1Q8NGX9 317 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 SCAMP4Q969E2 229 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 TOE1Q96GM8 510 aaKnown RBP18.65■□□□□ 0.58
CDK4-202ENST00000312990 PLEKHG4BQ96PX9 1271 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 ACSS3Q9H6R3 686 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 WSB2Q9NYS7 404 aaPredicted RBP18.65■□□□□ 0.58
CDK4-202ENST00000312990 SLC17A6Q9P2U8 582 aa18.65■□□□□ 0.58
CDK4-202ENST00000312990 NFKBIL1Q9UBC1 381 aaPredicted RBP18.65■□□□□ 0.58
CDK4-202ENST00000312990 DNAH14Q0VDD8 3507 aa18.64■□□□□ 0.57
CDK4-202ENST00000312990 MYO15AQ9UKN7 3530 aa18.64■□□□□ 0.57
CDK4-202ENST00000312990 A0A087WUV0 522 aaPredicted RBP18.64■□□□□ 0.57
CDK4-202ENST00000312990 A0A1W2PQU0 124 aa18.64■□□□□ 0.57
CDK4-202ENST00000312990 WNT9AO14904 365 aa18.64■□□□□ 0.57
CDK4-202ENST00000312990 SEMA4FO95754 770 aa18.64■□□□□ 0.57
CDK4-202ENST00000312990 CD6P30203 668 aa18.64■□□□□ 0.57
CDK4-202ENST00000312990 HOXA6P31267 233 aa18.64■□□□□ 0.57
CDK4-202ENST00000312990 MC4RP32245 332 aa18.64■□□□□ 0.57
CDK4-202ENST00000312990 STX2P32856 288 aa18.64■□□□□ 0.57
CDK4-202ENST00000312990 RPS21P63220 83 aaKnown RBP18.64■□□□□ 0.57
CDK4-202ENST00000312990 KBTBD12Q3ZCT8 623 aa18.64■□□□□ 0.57
CDK4-202ENST00000312990 HSP90AA5PQ58FG0 334 aa18.64■□□□□ 0.57
CDK4-202ENST00000312990 HENMT1Q5T8I9 393 aaKnown RBP18.64■□□□□ 0.57
CDK4-202ENST00000312990 NEK5Q6P3R8 708 aa18.64■□□□□ 0.57
CDK4-202ENST00000312990 HORMAD1Q86X24 394 aa18.64■□□□□ 0.57
CDK4-202ENST00000312990 C1orf210Q8IVY1 113 aa18.64■□□□□ 0.57
CDK4-202ENST00000312990 OR2T34Q8NGX1 318 aa18.64■□□□□ 0.57
CDK4-202ENST00000312990 TP53BP1Q12888 1972 aaPredicted RBP18.64■□□□□ 0.57
CDK4-202ENST00000312990 FANCMQ8IYD8 2048 aa18.64■□□□□ 0.57
CDK4-202ENST00000312990 GLYATL1P3A0A0U1RQE8 302 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 RGSL1A5PLK6 1076 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 FAM159BA6NKW6 160 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 CXorf49A8MYA2 514 aaPredicted RBP18.63■□□□□ 0.57
CDK4-202ENST00000312990 DYNC1I1O14576 645 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 AXIN1O15169 862 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 LZTS3O60299 673 aaPredicted RBP18.63■□□□□ 0.57
CDK4-202ENST00000312990 TM7SF2O76062 418 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 PRAMEF1O95521 474 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 SHBGP04278 402 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 PRSS56P0CW18 603 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 OXTRP30559 389 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 FOXN2P32314 431 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 AFTPHQ6ULP2 937 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 PTAR1Q7Z6K3 402 aaPredicted RBP18.63■□□□□ 0.57
CDK4-202ENST00000312990 NRSN1Q8IZ57 195 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 PELI3Q8N2H9 469 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 PNPLA1Q8N8W4 532 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 OR4L1Q8NH43 312 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 NUS1Q96E22 293 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 SGSM3Q96HU1 749 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 AGAP2Q99490 1192 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 C1QTNF2Q9BXJ5 285 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 ABCG8Q9H221 673 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 FAM83DQ9H4H8 585 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 PPANQ9NQ55 473 aaKnown RBP18.63■□□□□ 0.57
CDK4-202ENST00000312990 MARCH4Q9P2E8 410 aaPredicted RBP18.63■□□□□ 0.57
CDK4-202ENST00000312990 TNRC6BQ9UPQ9 1833 aaKnown RBP18.63■□□□□ 0.57
CDK4-202ENST00000312990 LRRC72A6NJI9 287 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 TNFRSF10AO00220 468 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 LAMTOR5O43504 91 aa18.63■□□□□ 0.57
CDK4-202ENST00000312990 SRP72O76094 671 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms