RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 TMEM120AQ9BXJ8 343 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 MRPL46Q9H2W6 279 aaKnown RBP11.86□□□□□ -0.51
TRIM40-205ENST00000307859 KCNK4Q9NYG8 393 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 XPR1Q9UBH6 696 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 FKBPLQ9UIM3 349 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 FBXO10Q9UK96 956 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 DENND4AQ7Z401 1863 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 ANKRD12Q6UB98 2062 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 A0A0G2JND7 137 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 CAPN8A6NHC0 703 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 MYO1CO00159 1063 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 TRIM13O60858 407 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 SLC4A1P02730 911 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 LTA4HP09960 611 aaKnown RBP11.86□□□□□ -0.51
TRIM40-205ENST00000307859 CTPS1P17812 591 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 SERPINA4P29622 427 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 ARRB2P32121 409 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 SCTRP47872 440 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 GLRBP48167 497 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 ARFIP2P53365 341 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 ABCE1P61221 599 aaKnown RBP11.86□□□□□ -0.51
TRIM40-205ENST00000307859 ECT2LQ008S8 904 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 TIAL1Q01085 375 aaKnown RBP eCLIP11.86□□□□□ -0.51
TRIM40-205ENST00000307859 PEX6Q13608 980 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 SETDB1Q15047 1291 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 PTPRRQ15256 657 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 DHCR24Q15392 516 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 CDKN3Q16667 212 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 MYLK3Q32MK0 819 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 TECRLQ5HYJ1 363 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 LIPMQ5VYY2 423 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 TMC5Q6UXY8 1006 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 LYSMD3Q7Z3D4 306 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 ADHFE1Q8IWW8 467 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 PLPP6Q8IY26 295 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 GDPD5Q8WTR4 605 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 HEXDCQ8WVB3 486 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 SREK1Q8WXA9 508 aaKnown RBP11.86□□□□□ -0.51
TRIM40-205ENST00000307859 EID2BQ96D98 161 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 RSPRY1Q96DX4 576 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 SCYL1Q96KG9 808 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 LRRC37BQ96QE4 947 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 LYSMD1Q96S90 227 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 CDCA3Q99618 268 aaPredicted RBP11.86□□□□□ -0.51
TRIM40-205ENST00000307859 SIKE1Q9BRV8 207 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 AARSD1Q9BTE6 412 aaKnown RBP11.86□□□□□ -0.51
TRIM40-205ENST00000307859 CPEB1Q9BZB8 566 aaKnown RBP11.86□□□□□ -0.51
TRIM40-205ENST00000307859 GPAMQ9HCL2 828 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 CPSF2Q9P2I0 782 aaKnown RBP11.86□□□□□ -0.51
TRIM40-205ENST00000307859 VPS9D1Q9Y2B5 631 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 CRYL1Q9Y2S2 319 aa11.86□□□□□ -0.51
TRIM40-205ENST00000307859 HOXC11O43248 304 aaPredicted RBP11.85□□□□□ -0.51
TRIM40-205ENST00000307859 DNAJC6O75061 913 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 LYPLA1O75608 230 aaPredicted RBP11.85□□□□□ -0.51
TRIM40-205ENST00000307859 CYP17A1P05093 508 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 ALPIP09923 528 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 PRSS56P0CW18 603 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 PMLP29590 882 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 GKP32189 559 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 MC4RP32245 332 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 VASPP50552 380 aaPredicted RBP11.85□□□□□ -0.51
TRIM40-205ENST00000307859 XIAPP98170 497 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 TCF15Q12870 199 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 CSHL1Q14406 222 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 FAM83EQ2M2I3 478 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 CARD16Q5EG05 197 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 AGAP9Q5VTM2 703 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 TMEM207Q6UWW9 146 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 NAPRTQ6XQN6 538 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 ATG14Q6ZNE5 492 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 ZSWIM9Q86XI8 627 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 NPAS3Q8IXF0 933 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 PIWIL2Q8TC59 973 aaKnown RBP11.85□□□□□ -0.51
TRIM40-205ENST00000307859 OSCP1Q8WVF1 389 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 SKA1Q96BD8 255 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 ERP27Q96DN0 273 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 GPR63Q9BZJ6 419 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 MYLK2Q9H1R3 596 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 DZANK1Q9NVP4 752 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 PPIL1Q9Y3C6 166 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 PKP3Q9Y446 797 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 LRRK1Q38SD2 2015 aa11.85□□□□□ -0.51
TRIM40-205ENST00000307859 REV3LO60673 3130 aa11.84□□□□□ -0.51
TRIM40-205ENST00000307859 WASH3PC4AMC7 463 aa11.84□□□□□ -0.51
TRIM40-205ENST00000307859 NDUFS3O75489 264 aa11.84□□□□□ -0.51
TRIM40-205ENST00000307859 DNAJC8O75937 253 aaPredicted RBP11.84□□□□□ -0.51
TRIM40-205ENST00000307859 POP4O95707 220 aaKnown RBP11.84□□□□□ -0.51
TRIM40-205ENST00000307859 ALOX15P16050 662 aaPredicted RBP11.84□□□□□ -0.51
TRIM40-205ENST00000307859 TTPAP49638 278 aa11.84□□□□□ -0.51
TRIM40-205ENST00000307859 CCNHP51946 323 aaPredicted RBP11.84□□□□□ -0.51
TRIM40-205ENST00000307859 ACAP2Q15057 778 aa11.84□□□□□ -0.51
TRIM40-205ENST00000307859 EML3Q32P44 896 aa11.84□□□□□ -0.51
TRIM40-205ENST00000307859 HSF5Q4G112 596 aaPredicted RBP11.84□□□□□ -0.51
TRIM40-205ENST00000307859 AARS2Q5JTZ9 985 aaKnown RBP11.84□□□□□ -0.51
TRIM40-205ENST00000307859 TMEM215Q68D42 235 aa11.84□□□□□ -0.51
TRIM40-205ENST00000307859 PSAPL1Q6NUJ1 521 aa11.84□□□□□ -0.51
TRIM40-205ENST00000307859 PIM3Q86V86 326 aa11.84□□□□□ -0.51
TRIM40-205ENST00000307859 PIANPQ8IYJ0 282 aa11.84□□□□□ -0.51
TRIM40-205ENST00000307859 RYBPQ8N488 228 aaPredicted RBP11.84□□□□□ -0.51
TRIM40-205ENST00000307859 GRIN3AQ8TCU5 1115 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms